Pairwise Alignments

Query, 448 a.a., Diguanylate cyclase from Sinorhizobium meliloti 1021

Subject, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  143 bits (360), Expect = 1e-38
 Identities = 82/194 (42%), Positives = 117/194 (60%), Gaps = 2/194 (1%)

Query: 243 ITILAQKTFLLELRDMRRVAELADANARLERLAKTDPLTGIANRRWMMETLNRLWSSGAE 302
           +T L ++   LE     R  ELA+AN RLE+L+ TD LT I NRR   + L + WS G  
Sbjct: 141 MTSLEERNRELESIIQARTYELAEANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQR 200

Query: 303 RRPGTAMLMCDIDDFKSLNDRLGHAEGDRCLVKVAGIIQSSVRRNRDHVARYGGEEFLVV 362
                +++M DID FK  ND  GH  GD CL  +A  +  S RR  + VARYGGEEF+++
Sbjct: 201 NNTPLSLIMLDIDHFKLFNDHYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVIL 260

Query: 363 LPGANEEAAVATAERIRASVEAASLPNPASRVAPYVTLSIGVAAQAPGEEIVAPEKLQNQ 422
           LP  + + A+ TA+ +   +++ ++P+  + +   VT+S+GVA   P ++  A E L +Q
Sbjct: 261 LPNTDLQTALDTAKHVHQLIQSLAIPHIKTNLG-IVTVSVGVACLLPSDKHNALE-LVHQ 318

Query: 423 ADAALYLAKQAGRN 436
           AD ALYLAK AGRN
Sbjct: 319 ADTALYLAKSAGRN 332