Pairwise Alignments

Query, 448 a.a., Diguanylate cyclase from Sinorhizobium meliloti 1021

Subject, 625 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  118 bits (296), Expect = 5e-31
 Identities = 79/198 (39%), Positives = 111/198 (56%), Gaps = 11/198 (5%)

Query: 248 QKTFLLELRDMRRVAELADANARLERLAKTDPLTGIANRRWMMETLNRLWSSGAERRPGT 307
           ++T  LE+     + EL + N +L   +  D LTG+ NR    + L  L  S   RR  T
Sbjct: 431 ERTLELEIT----LRELHEVNQKLTEQSTIDSLTGVKNRSAFDKRL--LAESRISRRQET 484

Query: 308 --AMLMCDIDDFKSLNDRLGHAEGDRCLVKVAGIIQSSVRRNRDHVARYGGEEFLVVLPG 365
             A+LM DID FKS+ND+ GH  GD+ L  +A  +Q  ++R  D V+R+GGEEF ++LP 
Sbjct: 485 PIALLMLDIDRFKSINDQFGHLAGDQALKLIAQTLQQHLKRPTDLVSRFGGEEFAIILPN 544

Query: 366 ANEEAAVATAERIRASVEAASLPNPASRVAPYVTLSIGVAAQAPGEEIVAPEKLQNQADA 425
              + A+  AE IR +V    L      +   +T+SIGV+A     E  + E L+ QAD 
Sbjct: 545 TTADGALQVAESIRDTVSCIGLTWEGKPIP--LTVSIGVSADVIMNEQHSTELLE-QADK 601

Query: 426 ALYLAKQAGRNRVVLYQP 443
           ALY AK +GRN+V LY P
Sbjct: 602 ALYQAKNSGRNQVKLYAP 619