Pairwise Alignments

Query, 448 a.a., Diguanylate cyclase from Sinorhizobium meliloti 1021

Subject, 574 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  124 bits (312), Expect = 6e-33
 Identities = 82/224 (36%), Positives = 125/224 (55%), Gaps = 11/224 (4%)

Query: 228 FFASGIIATVVARR-TITILAQK--------TFLLELRDMRRVAE-LADANARLERLAKT 277
           F A GII  V+A R  +  +A +        T  LEL+ M    E L    A+++ +A+T
Sbjct: 348 FMAKGIIKPVIATRDAMNAIANEKLDTQMPTTDNLELQQMVSSLETLKTYAAQVKTMAET 407

Query: 278 DPLTGIANRRWMMETLNRLWSSGAERRPGTAMLMCDIDDFKSLNDRLGHAEGDRCLVKVA 337
           D LTG  NRR++   + +  S   +     +++M D+D+FK  ND+ GH  GD+CL ++ 
Sbjct: 408 DGLTGCYNRRYLDNQILKELSYANDHNMPLSIVMFDLDNFKEFNDQYGHVNGDQCLRQIV 467

Query: 338 GIIQSSVRRNRDHVARYGGEEFLVVLPGANEEAAVATAERIRASVEAASLPNPASRVAPY 397
              +S ++R  D +ARYGGEEF+++LP ++ E A   AER+R +V    + +  S  +  
Sbjct: 468 NAAKSILQRPTDILARYGGEEFMLLLPSSHIEDAYKIAERLRETVIDLHIIHQGSSHSGI 527

Query: 398 VTLSIGVAAQAPGEEIVAPEKLQNQADAALYLAKQAGRNRVVLY 441
           VT+S+GVA   P E      KL +  D ALY AK AGRNR  ++
Sbjct: 528 VTISLGVACWQPPESFDV-NKLISHVDEALYRAKLAGRNRTEVF 570