Pairwise Alignments

Query, 728 a.a., MrcA2 penicillin-binding protein from Sinorhizobium meliloti 1021

Subject, 712 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  202 bits (515), Expect = 4e-56
 Identities = 117/283 (41%), Positives = 159/283 (56%), Gaps = 25/283 (8%)

Query: 436 VQGAIVSMDPNTGRVLASVGGFSFAQSRFNRATQASRQPGSAFKPFVYAAALDTGYTPAT 495
           +QGA+VS+DP  G + A VGG  F +S+FNRATQA RQPGS FK FVYAAA+ +G +P+ 
Sbjct: 295 LQGALVSIDPRDGAIRAMVGGVDFNRSQFNRATQAYRQPGSTFKMFVYAAAIASGMSPSQ 354

Query: 496 LVMDAPFSMPDGAGRLWKPKNYDGKFGGPSTLRTGLEMSRNLMTVRLARHLGMDLVAEYG 555
           + +DA  ++       +KP+N+   F G  +L   L  S N++ +++ R +G+D V    
Sbjct: 355 VYLDAAINLGG-----YKPQNFSRSFSGSISLTQALTNSVNIVAIKVLRDVGIDNVIRVA 409

Query: 556 RAFGLYDKLAPYLPMSLGAGETTLTRLVSAYAVLANGGHAVQPSMIDRIQDRHGRTIFRH 615
           R  G+   LA Y P++LGA + TL  + SAY  LAN G  + P  I  I D  GR +++ 
Sbjct: 410 RQMGIRADLARYYPLALGASDVTLLEITSAYGTLANQGKYLTPHPIAEIIDHRGRVLYQD 469

Query: 616 DDRACDRCNATRWLHQEEPVLRDTRKQVLDPMTAYQVTSMLRGVVERGTAHRVSQLGAPV 675
                          Q +PV      Q LDP +A  VTSML  VV  GT          V
Sbjct: 470 --------------KQIKPV------QALDPGSAAIVTSMLERVVTSGTGAAAYLPDRAV 509

Query: 676 AGKTGTTNDEKDVWFVGYTPTLVTGIFMGYDAPKPMGYAKRAA 718
           AGKTGTT   +D+WF+GY P LVTG+++GYD   P G    AA
Sbjct: 510 AGKTGTTEQARDLWFIGYIPQLVTGVWLGYDNFAPTGSGSSAA 552



 Score =  197 bits (500), Expect = 2e-54
 Identities = 117/287 (40%), Positives = 167/287 (58%), Gaps = 12/287 (4%)

Query: 54  DGTPIAEYARERRLYLPIAAIPERVKAAFLSAEDKSFYSHSGIDVLSVVKAAWSNAVNLS 113
           D T + +     R  +P   IP R++ AFL+AED+ FY HSGID+  + +A+     NL 
Sbjct: 36  DNTVLQKIGPATRDKVPFKQIPLRLRQAFLAAEDRRFYEHSGIDLFGIARAS---VTNLL 92

Query: 114 SGQRLIGASTITQQLAKNFLLSSDRTLRRKIKEAVLSIRIERSLSKDRILELYLNDIYLG 173
           SGQ   GASTITQQLA+   LS +R+L+RK+ EA+++ ++E+ L+KD+ILE YLN +YLG
Sbjct: 93  SGQVQEGASTITQQLARIVFLSQERSLQRKLNEALMAQKLEQELTKDQILEQYLNLVYLG 152

Query: 174 LGAYGIAAGALTYFEKSVSELTVAEAAYLAALPKGPNNYNPHRHPERAVSRRNWVIGQMQ 233
            GAYG+A  A TYF K V +L++ E A LA LP  P  Y+P    E A  RRN V+ +MQ
Sbjct: 153 AGAYGVADAAWTYFSKPVQDLSLGEMATLAGLPPAPTAYSPLVSLEVAQERRNSVLSRMQ 212

Query: 234 RNGFVSAAQASNMMARPLGVKPQAKNPVMAEANYFVEEVRREVAGQYGEAALYDGGLSVR 293
             GF++ ++A      PL +KP A     + A YF + VR+E+        L  GGL+++
Sbjct: 213 EVGFITPSEAEAARREPLALKPAAPKYAQSLAPYFTDYVRQELPRFVAPDVLEYGGLTLK 272

Query: 294 TTL--------DPTLQAAALMALRAGLVDYDQARG-FRGPVAHIDIS 331
           TTL        D  +Q +   +L+  LV  D   G  R  V  +D +
Sbjct: 273 TTLNYRWQQAADQAIQNSTYGSLQGALVSIDPRDGAIRAMVGGVDFN 319