Pairwise Alignments

Query, 728 a.a., MrcA2 penicillin-binding protein from Sinorhizobium meliloti 1021

Subject, 779 a.a., peptidoglycan glycosyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  199 bits (506), Expect = 4e-55
 Identities = 113/281 (40%), Positives = 177/281 (62%), Gaps = 18/281 (6%)

Query: 35  DHRKLAEW--EPALMTRFYAYDGTPIAEYARERRLYLPIAAIPERVKAAFLSAEDKSFYS 92
           D R+LA +  EP L+ R  A DG        E RL++P   +P+ +  A L  ED+SFY 
Sbjct: 160 DKRELAVFHLEPMLLDRLIADDG--------EDRLFVPRREVPDTMVEALLLVEDRSFYE 211

Query: 93  HSGIDVLSVVKAAWSNAVNLSSGQRLIGASTITQQLAKNFLLSSDRTLRRKIKEAVLSIR 152
           H G++  ++++AA+   VN+S+G+ + G ST+TQQLAKNF LSS+R+L RK++EA+++I 
Sbjct: 212 HHGVNPFAILRAAF---VNISAGRTVQGGSTLTQQLAKNFFLSSERSLIRKVREALMAII 268

Query: 153 IERSLSKDRILELYLNDIYLG----LGAYGIAAGALTYFEKSVSELTVAEAAYLAALPKG 208
           I+   SKD ILE YLN++Y+G     G +G+   +  YF + ++ELT A+ A+L A+ KG
Sbjct: 269 IDFRYSKDEILEAYLNEVYMGQDKSRGVHGMGLASQFYFGRPLTELTTAQQAFLIAVIKG 328

Query: 209 PNNYNPHRHPERAVSRRNWVIGQMQRNGFVSAAQASNMMARPLGVKPQAKNPVMAEANYF 268
           P+ YNP R+P RA  RR+ V+  +  +G +S          PLG++P+ + PV      F
Sbjct: 329 PSYYNPWRYPARAQERRDLVLRLLMESGKISVNDFQIAAESPLGLRPEGR-PVHQRMPAF 387

Query: 269 VEEVRREVAGQYGEAALYDGGLSVRTTLDPTLQAAALMALR 309
             +V++E+A ++G++ L + G+ V TTLDP  Q AA  A++
Sbjct: 388 YTQVKKELALRWGDSLLNESGIKVYTTLDPIAQEAAEKAVK 428



 Score =  120 bits (301), Expect = 3e-31
 Identities = 92/320 (28%), Positives = 141/320 (44%), Gaps = 26/320 (8%)

Query: 391 MRWALKLAAGGKIRQVDSIDKVLSPGDVIYVEKVGNGYLLRQIPEVQGAIVSMDPNTGRV 450
           +RW   L     I+   ++D +        V++V  G + +   E+Q A+V  D   G +
Sbjct: 397 LRWGDSLLNESGIKVYTTLDPIAQEAAEKAVKEV-MGRIGKDTKELQAAMVVTDKFGGGI 455

Query: 451 LASVGGFSFAQSRFNRATQASRQPGSAFKPFVYAAAL-DTGYTPATLVMDAPFSMPDGAG 509
            A VG  + +   +NR ++  R  GS  KPFVY  AL D+ Y   T + D P ++ +  G
Sbjct: 456 AAMVGDRNPSFEGYNRVSEMRRPIGSLVKPFVYMTALEDSNYNLMTSLKDEPLTVTNKHG 515

Query: 510 RLWKPKNYDGKFGGPSTLRTGLEMSRNLMTVRLARHLGMDLVAE-YGRAFGLYDKLAPYL 568
           + W P NYD  F G   L   +  S N+ TV L   +G+D V      A    + + PY 
Sbjct: 516 QSWSPMNYDKTFSGQVPLMRAMYKSLNVPTVNLGLAVGVDAVINTLDDAGWRGEAINPYP 575

Query: 569 PMSLGAGETTLTRLVSAYAVLANGGHAVQPSMIDRIQDRHGRTIFRHDDRACDRCNATRW 628
            M LGA + +   +   Y  LA+ G   Q S +  + D +   I                
Sbjct: 576 SMLLGAVDGSPLMVAQIYQTLADNGRYRQLSTVTDVLDMNNEAIL--------------- 620

Query: 629 LHQEEPVLRDTRKQVLDPMTAYQVTSMLRGVVERGTAHRVSQL--GAPVAGKTGTTNDEK 686
                   R   +Q L+P  AY    ++  VV  GT  R+ +      +AGKTGT+ND +
Sbjct: 621 ------ASRLPSEQSLEPAAAYLSQYIMTRVVSEGTGARLGRAFPNVTLAGKTGTSNDSR 674

Query: 687 DVWFVGYTPTLVTGIFMGYD 706
           D WF G+    V  +++G D
Sbjct: 675 DSWFAGFDERNVAAVWVGRD 694