Pairwise Alignments

Query, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 367 a.a., ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 21/288 (7%)

Query: 27  LRVTTWGGSYQ-ATYQAVAQKFEEEHNCR-IEWVVGASPDHLIKARLG----QVDVVTNT 80
           LR+ TW      A  + +A  FE +   + I    G++ + + K + G    Q D++T  
Sbjct: 44  LRLLTWSDDTGLAALRNIAATFEAKTGAKVIADRTGSTSEMVAKLKAGGDRPQYDIITLA 103

Query: 81  LLNSIAGEKEGLWQKLDPAKIPNMANL---YPNAVHSP---YTVFANVGDYVLAYNKDTV 134
            + +      GL +K D  +IPN+A++   Y          Y ++ N     L Y+  T+
Sbjct: 104 GVGAEGLAVAGLLEKPDLNRIPNLADVPAQYRTGAGGHGIGYLLWCNS----LVYSTRTL 159

Query: 135 TTVPATWDELWKPEYKNRVVIYGIDHIPTLSLTVLQAEKNGGSIDNVEPGLDRMAELIKS 194
              P ++  LW  E    + +   +    + L ++ A+  GG   N+EPG  ++AEL   
Sbjct: 160 QQAPDSYAALWDAELAPNIFLPPPNWTEAMDLIIIAAKLAGGDEHNIEPGFKKLAELKDR 219

Query: 195 GNLIGSLDVESQMVSLFETGDAWLGMLATGRM--KELLSKGVTNVSFVRPEEGTF-PLIT 251
              +G  +  +Q+  LF TG   +G L       K++     +  +    +EG +  L+ 
Sbjct: 220 VVTLG--ENPNQIAELFRTGSLDMGGLYAPAFFPKQIRDPAYSLGATFGMKEGFYTDLML 277

Query: 252 SVNIHKDAKNPAMAAAFVNYILSSEVQVAFATRNLYAPTVKNAEIPDD 299
           SV       +  +A AF+++ L   VQ   A      P    A I  +
Sbjct: 278 SVMPKNRPGDTDLAYAFIDHSLDPLVQGKMAEDIFNGPVNAKAIISSE 325