Pairwise Alignments

Query, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 81/317 (25%), Positives = 129/317 (40%), Gaps = 27/317 (8%)

Query: 3   IRHLIAGAAISASWAGMAVAEDCALRVTTWGGSYQATYQAVAQKFEEEHNCRIEWVVGAS 62
           ++  I G  +SA  A   V  +  L V  WGG      +   + FE++    I +    +
Sbjct: 1   MKTFIKGLVLSAVVASSQVYAEQTLNVYAWGGYLP---EKSLKAFEQQEGVTINYSTFEN 57

Query: 63  PDHL---IKARLGQ-VDVVTNTLLNSIAGEKEGLWQKLDPAKIPNMANLYPNAV---HSP 115
            + +   +K   G   DVV  +        +EGL  ++D  +IPNM +  P  +   H P
Sbjct: 58  NESMYTKLKLLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDP 117

Query: 116 YTVFANV---GDYVLAYNKDTVTTVPATWDELWKPEYKNRVVIYGIDHIPTLSLTVLQAE 172
              F+     G   L YN  T+      W +LW  +Y+ +V++  ID I  +    L+  
Sbjct: 118 QNKFSLPYIWGITGLYYNSSTLPNGITKWADLWDKQYEQQVML--IDDIRDVFGMALKL- 174

Query: 173 KNGGSI-----DNVEPGLDRMAELIKSGNLIGSLDVESQMVSLFETGDAWLGMLATGRMK 227
            NG SI     + ++   + +  L K+  L  S       VS    G+A LGM   G   
Sbjct: 175 -NGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVS----GEATLGMQWNGNAY 229

Query: 228 ELLSKGVTNVSFVRPEEGTFPLITSVNIHKDAKNPAMAAAFVNYILSSEVQVAFATRNLY 287
           +   + +  + FV PEEG    + +  I   +KN  +A  F+N++   E Q        Y
Sbjct: 230 QGQVE-MPELKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGY 288

Query: 288 APTVKNAEIPDDFEFRD 304
           A   K        E RD
Sbjct: 289 ASATKGGRALLPAELRD 305