Pairwise Alignments

Query, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 70.1 bits (170), Expect = 8e-17
 Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 42/351 (11%)

Query: 6   LIAGAAISASW-AGMAVAEDCALRVTTWGGSYQATYQAVAQKFEEEHNCRIEWVVGASPD 64
           L+AG+A + S  +G A AED  L    WG    +    + ++F +E   ++ +    S +
Sbjct: 7   LLAGSACALSLLSGTAAAEDKELVFMNWGPYINS---GILEQFTKETGIKVIYSTYESNE 63

Query: 65  HL---IKARLGQVDVVTNTLLNSIAGEKEGLWQKLDPAKIPNMANLYPNAVHSPYT---- 117
            L   +K      D+V  +         EG+ QK+D +K+ N  NL  N +  PY     
Sbjct: 64  TLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNND 123

Query: 118 -----VFANVGDYVLAYNKDTVTTVP-ATWDELWKPEYKNRVVIYGIDHIPTLSLTVLQA 171
                V A  G   LA N D        +W +LWKPE K ++++   D      + + + 
Sbjct: 124 YSIPHVVAITG---LAVNTDMYDPNDFQSWGDLWKPELKGQLMLMD-DTREVFHIALRKL 179

Query: 172 EKNGGSIDN--VEPGLDRMAELIKSGNLIGSLDVESQMVSLFETGDAWLGMLATGRMKEL 229
             +G S D+  ++     + +L+ +  +  S +  +  +S    G+  LGML  G     
Sbjct: 180 GYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLS----GEVGLGMLWNGSAAAA 235

Query: 230 LSKGVTNVSFVRPEEGTFPLITSVNIHKDAKNPAMAAAFVNYILSSEVQVAFATRNLYAP 289
             +G+  +  V P+EG    + +  I   AKN   A   ++++L  E+    +    Y  
Sbjct: 236 QKEGLP-IKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLT 294

Query: 290 TVKNAEIPDDFEFRDLLVLNDAFGRLYLPDQEKITANKAGWQQQLNQKAMR 340
            VK      + +F+D+  L         P QE +  ++  WQ  +  K ++
Sbjct: 295 GVK----ASNDKFQDVAPL--------FPSQEDL--DRVEWQSAVGDKTVK 331