Pairwise Alignments

Query, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 372 a.a., extracellular solute-binding protein family 1 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 71/295 (24%), Positives = 109/295 (36%), Gaps = 38/295 (12%)

Query: 20  AVAEDCALRVTTWGGSYQATYQAVAQKFEEEHNCRIEWVVGASPDHLI----KARLGQVD 75
           A A+   L +  W G  +     +   FEE +N +         D+++    ++  G  D
Sbjct: 31  AAAQTTELSMLAWYGHAEPD---IVGAFEEANNVKFVPKYYTGGDNMLGLIAQSPRGTFD 87

Query: 76  VVTNTLLNSIAGEKEGLWQKLDPAKIPNMANLYPNAVHSP--------YTVFANVGDYVL 127
           V+ +           G  ++LDPA      + +P     P        ++V    G   +
Sbjct: 88  VILSDAEYVQQLNAAGFIEELDPADYA-FDDFFPEFQKFPGHWQDDKLFSVITRFGFLGV 146

Query: 128 AYNKDTVTTVPATWDELWKPEYKNRVVIYGIDHIPTLSLTVLQAEKNGGSIDNVEPGLDR 187
           AYN D  T   A+  +L+  E     + +   H+P L    L    N    D  E   +R
Sbjct: 147 AYNTDAFTAEEASSYDLFADERLTGKLGHFDWHLPNLGQMSLHVG-NASPYDIDEAAWER 205

Query: 188 MAE-----------LIKSGNLIGSLDVESQMVSLFETGDAWLGMLATGRMKELLSKGVTN 236
           + E               G    SLD   QM++    GD W+    TG     L K  + 
Sbjct: 206 VQEHTMGLRRQAGGFFDYGGTFSSLD-NGQMLAFAGIGD-WI----TGT----LEKNGSP 255

Query: 237 VSFVRPEEGTFPLITSVNIHKDAKNPAMAAAFVNYILSSEVQVAFATRNLYAPTV 291
           V  V PE+G      S +I K ++N  MA  ++ YI S E Q   A    Y   V
Sbjct: 256 VRSVIPEQGGLQWTESFSIGKGSRNQEMAKKWIQYITSPEGQAKSADMAAYPAIV 310