Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 278 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  105 bits (261), Expect = 1e-27
 Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 7/239 (2%)

Query: 20  AFLIFPIAVTLIVAVNPREFVLPPNGFTLDWFRAAWSSKTFLRGMGVSLVLGLAAALIAN 79
           AFL  PI + +I + N    V    GF+  W+ A    +  L    +S  + +  A +A 
Sbjct: 16  AFLYVPILLLMIYSFNESRLVTVWAGFSAKWYGALLRDEQMLGAAWMSFRIAVVNASLAT 75

Query: 80  ALALPAAIALARTN-FPGKGAINLILMTPLLIPTTILSLALYIYFVRVGY------GSGL 132
            L   AA+A+ R   F G+   + +L  PL++P  I  LA  + FV +        G G+
Sbjct: 76  ILGTLAALAMVRFGRFRGRTLFSGMLSAPLVMPEVITGLASLLLFVALEQLLGWPQGRGM 135

Query: 133 VPLLVGHAIHIMPYAVRILTASLLNFDPSYEEAARNVGAGRIRTLFSVTLPVIRTGLISS 192
             + + H      Y   +L + L   D S EEAA ++GA   +    +T+PVI   L++ 
Sbjct: 136 TTITIAHITFSTAYVAVVLQSRLQGMDRSIEEAAMDLGARPAKVFLLITIPVIAPALVAG 195

Query: 193 LTLCFILSWNDFPISVFLAPPSWTPLPVELYSYIKFQYDAVAAALASSLILLSAVAMVV 251
             L F LS +D  I+ F++ P+ + LP+ ++S ++        ALA+ L+L + VA+++
Sbjct: 196 WLLSFTLSLDDLVIASFVSGPASSTLPMVVFSSVRLGVSPEINALATILVLTATVAILI 254