Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 275 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (250), Expect = 3e-26
 Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 8/246 (3%)

Query: 13  LVTFSMMAFLIFPIAVTLIVAVNPREFVLPPNGFTLDWFRAAWSSKTFLRGMGVSLVLGL 72
           L+ +  M FL  P+ + +  + N  + V    GF+  W+   +     L  +  SL +  
Sbjct: 13  LMLWGGMFFLYAPMFILVFYSFNESKLVTVWGGFSAKWYGELFRDDQILDAVATSLKVAF 72

Query: 73  AAALIANALALPAAIALAR-TNFPGKGAINLILMTPLLIPTTILSLALYIYFVRV----G 127
            A+ +A  L   AA  + R     GK  ++ ++  PL++P  I  L+L + FV +    G
Sbjct: 73  FASTMAVILGTMAAFVMTRFARSWGKMTLSNMITAPLVMPEVITGLSLLLLFVHMADLLG 132

Query: 128 YGS--GLVPLLVGHAIHIMPYAVRILTASLLNFDPSYEEAARNVGAGRIRTLFSVTLPVI 185
           + +  G++ + + H+     Y   ++++ L   D S EEAA+++GA  ++T F +T+P+I
Sbjct: 133 WPAERGMLTVWIAHSTFCAAYVAVVVSSRLRELDMSIEEAAQDLGATPLKTFFHITVPMI 192

Query: 186 RTGLISSLTLCFILSWNDFPISVFLAPPSWTPLPVELYSYIKFQYDAVAAALASSLILL- 244
              LI+   L F LS +D  I+ F + P  T LP+ ++S ++        ALA+ +IL+ 
Sbjct: 193 SPALIAGWLLSFSLSLDDLVIASFASGPGATTLPMVVFSSVRMGVSPKINALATLIILIV 252

Query: 245 SAVAMV 250
           S +A +
Sbjct: 253 SLIAFI 258