Pairwise Alignments

Query, 296 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 87.0 bits (214), Expect = 4e-22
 Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 16/230 (6%)

Query: 49  IKLVTDAKYPPFQSVNDAGEIVGFEVDLWNAIADRLNVKVDVTSVSFDSLIPGVQAGRWD 108
           IK V +A Y PF+ +++  +I GF+VDL NA+  +L  K    + +FDSLIP ++  R+D
Sbjct: 23  IKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEAKCSFHNQAFDSLIPALKFKRYD 82

Query: 109 IAMEGITDNAERQKVVSFVDYGYTTSSAYVLEQKGSEIKDHLGLCGLKGSAQSGTEWVGM 168
            A+  +     R + V+F +  Y  S+A+V      ++ D   L G +   Q+G+     
Sbjct: 83  AAISAMDITEARLEQVNFSNPYYDNSAAFV--SLAGKVADQAALKGKRVGVQNGSTHQSF 140

Query: 169 IAKEIGDACVAAGKDKPSVSEFGTSEATLLSLYSGRSDFVLTSAALAGEIQK----VAPH 224
           + +++ D              + + +   + + +GR D V    A+  E  K    +A  
Sbjct: 141 LLEQLSDVVAV---------PYSSYQDAFIDMKNGRIDSVFGDTAVVAEWFKGDNNLAYV 191

Query: 225 PVKVIPMQILPRMPSGIAFRKDETDLGDALLLALKEIRANGDYEKIYAKW 274
             +V   Q       GIA  KD   L D L  AL+ ++ NG+Y  I+ K+
Sbjct: 192 GERVTNAQYFGN-GFGIAVNKDNQALLDQLNAALEAVKENGEYAAIFNKY 240