Pairwise Alignments

Query, 296 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 263 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

 Score = 96.3 bits (238), Expect = 7e-25
 Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 18/272 (6%)

Query: 4   VKANRYQTAVAATAWVAVGVVLTTGAVHAQTAADILPQIYRDAGVIKLVTDAKYPPFQSV 63
           +   +  TA+ A A + +G    T A+    A          A  I+  T+  +PPF   
Sbjct: 2   ISMKKTATALFAAAGILLGGQAVTMALGVADAR---------AETIRFATEGAFPPFNFT 52

Query: 64  NDAGEIVGFEVDLWNAIADRLNVKVDVTSVSFDSLIPGVQAGRWDIAMEGITDNAERQKV 123
           + AG+  GF++D+ NA+  +L  +  + +  +D +IPG+ A ++D  +  ++   ERQ+ 
Sbjct: 53  DAAGKPQGFDIDIANALCAQLKAECSMVTQDWDGIIPGLLAKKYDAIIASMSITPERQQS 112

Query: 124 VSFVDYGYTTSSAYVLEQKGSEIKDHLGLCGLKGSAQSGTEWVGMIAKEIGDACVAAGKD 183
           V F D  Y  +  + +  KG +    L   GLKG A  G +   + ++ I D       D
Sbjct: 113 VLFTD-AYYNNQFHFVGPKGKDF--DLSKAGLKGKA-IGAQRATVSSQWIEDTL----GD 164

Query: 184 KPSVSEFGTSEATLLSLYSGRSDFVLTSAALAGE-IQKVAPHPVKVIPMQILPRMPSGIA 242
             S++ + T+E   L L +GR D +L       + +   A    ++    ++     GIA
Sbjct: 165 TVSLNLYDTAEEAYLDLEAGRVDLLLNDTYPTYDWLNSPAGQAYELKGESVIKDDVVGIA 224

Query: 243 FRKDETDLGDALLLALKEIRANGDYEKIYAKW 274
            RKD+T L   L  ALKEI ANG Y KI  K+
Sbjct: 225 LRKDDTALAAKLNGALKEIIANGTYAKINEKY 256