Pairwise Alignments

Query, 409 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 300 a.a., tyrosine recombinase XerC from Klebsiella michiganensis M5al

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 86/298 (28%), Positives = 133/298 (44%), Gaps = 23/298 (7%)

Query: 113 ASPY-PLLDDYQSWLRVHRGLAERTIARHLRHLHKLLPELGTPTL----DYDAALIRNV- 166
           ASP  P ++ +  +L V R L+  T+  + R L  L+       L      DAA +R++ 
Sbjct: 3   ASPLLPSVERFLRYLGVERQLSPITLLNYRRQLETLIALAENAGLKSWQQCDAAQVRSLA 62

Query: 167 VREWRERTGPADLRTITSALRSYLRFLAGVGLCRPNLDHAIPPVLQWRLSSLPRYLAAAD 226
           VR  R+  GPA L    SALRS+  +L   G    N    I      R   LP+ +   D
Sbjct: 63  VRSRRQGLGPASLALRLSALRSFFDWLVSQGELAANPAKGISAPKTPR--HLPKNIDVDD 120

Query: 227 VERVIASCDQLTRGRLRDRAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRLSGKARRQV 286
           V R++   D      +RDRA+L ++   GLR  ++  L +  ++  SG + + GK  ++ 
Sbjct: 121 VNRLL-DIDLNDPLAVRDRAMLEVMYGAGLRLSELVNLDIKHLDLESGEVWVMGKGSKER 179

Query: 287 RLPLPQDVGDALLAYIEQERP-----RMHQEAVFLTMIAPYRSFAQSSHVSTIVALALKR 341
           RLP    +G   +A+IE            ++A+FL+ +    S   + +V    A    +
Sbjct: 180 RLP----IGRNAVAWIEHWLDLRGLFGADEDALFLSKLGKRIS---ARNVQKRFAEWGVK 232

Query: 342 AGISDPPSTGACLLRHSAATSMLRSGATLEAVGTVLRHRSLDMTAHYAKVDAAMLEQV 399
            G++         LRHS AT ML S   L  V  +L H +L  T  Y  +D   L  V
Sbjct: 233 QGLNS--HVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASV 288