Pairwise Alignments

Query, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas stutzeri RCH2

 Score =  125 bits (314), Expect = 1e-33
 Identities = 86/227 (37%), Positives = 121/227 (53%), Gaps = 23/227 (10%)

Query: 74  GNKARSRNARLAAVKSFFRYLEHRVPAVLDQALRVHAMPMKKIDEALVASLSRTEVQALL 133
           G KARS    L+ ++ F+RYL       +D  LRV    + ++   L  +LS  +V+ALL
Sbjct: 67  GYKARSTARFLSGLRGFYRYLLREGEIAVDPTLRVD---LPRLGRPLPKALSEADVEALL 123

Query: 134 NAPDRRSLSGIRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIHIIGKGRRERVLPL 193
            APD     G+RDRAML + +A GLRV+EL+ LTL+Q   R    +   GKG +ER++PL
Sbjct: 124 AAPDLGDPIGLRDRAMLEVLYACGLRVTELISLTLEQVSMRQ-GVLRTFGKGNKERLVPL 182

Query: 194 WQETAAAIRAWIAVRPKNG---------DTALFLNNAGRMMTRSGFEYILEKHAAAAVSV 244
             E       W+    + G            LF +  G  MTR  F + ++ HA  A   
Sbjct: 183 GDEAL----HWLERYQREGRDELLGGKARDVLFPSLRGDQMTRQTFWHRIKLHAKVA--- 235

Query: 245 APTLATKSISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIY 291
              +AT SISPH LRH+ A H+L    D+R V + LGH+ L +T+IY
Sbjct: 236 --GIAT-SISPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIY 279