Pairwise Alignments

Query, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (248), Expect = 6e-26
 Identities = 82/247 (33%), Positives = 125/247 (50%), Gaps = 16/247 (6%)

Query: 73  RGNKARSRNARLAAVKSFFRYLEHRVPAVLDQALRVHAMPMKKIDEALVASLSRTEVQAL 132
           +G KA S   RL++++SF  +L  R     + A  V A P K+    L  +L   E+  L
Sbjct: 75  QGMKASSIATRLSSLRSFLDFLILRGELQANPAKGVSA-PRKQ--RTLPKNLDVDEMAQL 131

Query: 133 LNAPDRRSLSGIRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIHIIGKGRRERVLP 192
           L   D   LS IRDRA++ L +  GLR++ELV + +   +  S   I +IGKG +ER + 
Sbjct: 132 LEVTDDDPLS-IRDRAIMELMYGAGLRLAELVSIDIKDVN-LSEGEIRVIGKGNKERKVW 189

Query: 193 LWQETAAAIRAWIAVRPKNGD---TALFLNNAG-RMMTRSGFEYILEKHAAAAVSVAPTL 248
              +    +  W+ +R +  D   TALF++  G R+  RS  + + E     AV+     
Sbjct: 190 FAGQAQEWVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVA----- 244

Query: 249 ATKSISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIYLRADPTEKLEMLDALAP 308
               ISPH LRHS A HML+++ ++R V   LGH ++ +T+IY   D     ++ D   P
Sbjct: 245 --SHISPHKLRHSFATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHP 302

Query: 309 LGIKPGK 315
              K  K
Sbjct: 303 RARKKNK 309