Pairwise Alignments

Query, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 301 a.a., tyrosine recombinase XerC from Dechlorosoma suillum PS

 Score =  112 bits (281), Expect = 9e-30
 Identities = 94/303 (31%), Positives = 140/303 (46%), Gaps = 19/303 (6%)

Query: 10  AFLREHLPRERRASVHTCDAYAYSFQLLVTFAARRLSKRPCLLQIEDIDVPMILAFLEHI 69
           AFL E L  +RR S HT   Y      L+  AA  L   P L +++   +   +  L   
Sbjct: 9   AFLDE-LATQRRQSPHTVSNYRRDLGKLLALAAE-LPGSPGLGELQSHHIRRFVGLLHG- 65

Query: 70  EETRGNKARSRNARLAAVKSFFRYLEHRVPAVLDQALRVHAMPMKKIDEALVASLSRTEV 129
              RG   RS    L+A + F+R+L     A  +    V      K  +AL  +LS  E 
Sbjct: 66  ---RGLAGRSLARSLSAWRVFYRWLGRHGHAGHNPCEGVRP---PKSPKALPRTLSPDET 119

Query: 130 QALLNAP-DRRSLSGIRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIHIIGKGRRE 188
             LL    D      +RD+AM  L ++ GLR++EL  L +D         + + GK  +E
Sbjct: 120 ARLLETSIDPDDPQELRDQAMFELFYSSGLRLAELAELDVDALTDIGGGEVRVHGKRDKE 179

Query: 189 RVLPLWQETAAAIRAWIAVRPKNG---DTALFLNNAGRMMTRSGFEYILEKHAAAAVSVA 245
           RV+P+  +   A+ AW+A RP+     + ALF+   GR +     +  L + A  A    
Sbjct: 180 RVVPVGSKARQALAAWMARRPELARPEEKALFVGARGRRIAHGIIQQRLSRRALLAG--- 236

Query: 246 PTLATKSISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIYLRADPTEKLEMLDA 305
                  + PH+LRHS A H+LQ++ D+R V   LGHAS+ ST++Y   D     ++ D 
Sbjct: 237 ---LPSHVHPHMLRHSFASHVLQSSGDLRAVQEMLGHASIASTQVYTHLDFQHLAQVYDT 293

Query: 306 LAP 308
             P
Sbjct: 294 AHP 296