Pairwise Alignments

Query, 545 a.a., Transposase from Sinorhizobium meliloti 1021

Subject, 522 a.a., Mobile element protein from Pseudomonas fluorescens FW300-N2E2

 Score =  283 bits (724), Expect = 1e-80
 Identities = 177/504 (35%), Positives = 255/504 (50%), Gaps = 26/504 (5%)

Query: 34  MSATLQAHDQLIGELRLRIAKLKKQVFGKSSEKIEREIQQLELALEDLLIAAAENSTKPL 93
           M   +     +I +L   IA+LK+  F K SE++  E   L   L D  IAA E   + L
Sbjct: 43  MGKKINRDQTVIEKLTHEIAQLKRLKFAKRSEQMNPEQAGLLDDLVDTDIAAIEAELQAL 102

Query: 94  DEVDAAVPAAPVASRPEKTMRRRPRVSEKAARERKELDP-GTCCPDCGGELRLVGEDASE 152
             V        +A   +K   +R  +S +  R     +P  T CP C   L+ +GED SE
Sbjct: 103 QTV--------LAPTEKKQKPKRTALSAEFPRTLIHHEPDNTHCP-CACALKRIGEDVSE 153

Query: 153 ILDMIAAQMKVIEVARLKKSCRCCEKMVQLPAPSRPIPGSMAGAGLLAYILVSKFDDHLP 212
            LD       V    R K  C  CE ++Q P P++ I   +  AGLLA+++++KF DHLP
Sbjct: 154 KLDYTPGVFTVERHIRGKWVCDDCETLIQAPVPAQVIDKGIPTAGLLAHVMIAKFADHLP 213

Query: 213 LYRLNEIFARMGADIPDSTLVDWCGRAMQVLQPLIERIEAVVMSSDLLHADDTPIRVLDR 272
           LYR   IF R G  IP STL  W G     LQPL++ +  VV+   ++HAD+TP+++L  
Sbjct: 214 LYRQESIFGRAGLAIPRSTLAQWVGVTGVQLQPLVDALRDVVLGQQVIHADETPVQMLVP 273

Query: 273 SLRDKGLGKGVKKGRIWTYVRDQRPWAGAAPPGAVYYFAPDWKEEHVHHHLRQTSGILQA 332
                   K  ++  +W Y   Q     A     VY F+P    EH  + L+     L  
Sbjct: 274 G------SKKTQRSYVWAYTTSQFSNLAAV----VYDFSPSRAGEHARNFLQDWKCKLVC 323

Query: 333 DGYKGYGKLYEPGADGIGRFREAACWAHWRRDFHDIWTSNKSEIAREALDRIGALYDIER 392
           D + GY   +E G   IG      C AH RR F ++  +NKS +A +AL  I  LY+IE 
Sbjct: 324 DDFGGYKASFELGVTEIG------CMAHARRKFFELHATNKSTLAEQALRYIQLLYEIES 377

Query: 393 DIAGQPADIRLAARQKHSTAKVEALRVWAEAQLTRIPGKGDLASAFRYGLSRWHSFCLFL 452
           ++     D+R   RQ+ +   ++ L  W  AQ   +P    ++ A  Y L RW +   +L
Sbjct: 378 EVRDLEPDLRRRIRQERAVPVMDMLHAWMIAQRDLVPEGSAISRALDYSLKRWAALSRYL 437

Query: 453 EDGRVAMDNNAAERALRPIGIGRKNWLFAGADTGAETLARAMTIIETAKMNGIDPQAYLA 512
           +DG V +DNN  E  +RP  +GRKNWLFAG+    +  A  M++I++A++NG DP AYL 
Sbjct: 438 DDGDVPIDNNWCENQIRPWALGRKNWLFAGSLRSGKRAAAIMSLIQSARLNGHDPYAYLK 497

Query: 513 DVLDRIHDHKINRLDELLPWNWAP 536
           DVL R+     + +D+LLP  W P
Sbjct: 498 DVLTRLPTQHASDIDQLLPHQWTP 521