Pairwise Alignments

Query, 339 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 360 a.a., Nucleoside ABC transporter, periplasmic nucleoside-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score = 83.6 bits (205), Expect = 7e-21
 Identities = 80/290 (27%), Positives = 122/290 (42%), Gaps = 20/290 (6%)

Query: 45  DIGWTRTLLDALEQVKQARPDGLDISWEYTDPLWND-DAENAMRFYAEGGEYDIIWAHG- 102
           D GWT       +++  A   G  I+  Y + +    DAE  +R  A+  +YD+I+    
Sbjct: 43  DHGWTYQHEQGRKEL--AAKFGEQITTNYVENVPEGADAERVIRNMAKD-KYDLIFTTSF 99

Query: 103 RYSDQVKKLSAEFPDIMFVVTGSGNLPLGANQYWLYKRLHEPSYLLGMLAGRTTKSGVVG 162
            Y +   K++ +FP ++F              Y    R +E  Y+ G LA + TK+  +G
Sbjct: 100 GYMNPTLKVAKQFPKVIFEHATGYKQDKNLGTY--LARTYEGRYVGGFLAAKMTKTKKIG 157

Query: 163 LVGTFAADDVNDQINAFLDGARSVRPDVRHRVSFIGSWSDNALAAEHANVQIASGADVVF 222
            V +F   +V   INA         P    +V ++ SW D    A+ AN  I  G DVVF
Sbjct: 158 YVASFPIPEVIRDINAIQLALNKYNPGSEIKVVWVNSWFDPGKEADAANALIDQGVDVVF 217

Query: 223 MLTDNFKPCQ--EHR-IICFANINDQSKLAPDAIASSAIIDWQPDIKWIISEWLKHKAGA 279
             TD+  P Q  E R +      +D +   P A+ +S + DW P         L H    
Sbjct: 218 QHTDSPAPIQAAERRGVYAVGYASDMAHFGPKAVLTSIVNDWGPHYIQATQSVLDH---- 273

Query: 280 PYDGNTEPKWFSMSQGGVDIAPYHDFDAKLPVAVKEELAATRQKIISGEF 329
             +  ++  W  + +G V + P  D    +P AVK E       I SG F
Sbjct: 274 --NWKSQDYWGGLKEGTVKL-PISDL---VPAAVKGEAEQIIADIESGTF 317