Pairwise Alignments

Query, 339 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 359 a.a., Basic membrane lipoprotein (NCBI) from Rhodospirillum rubrum S1H

 Score =  120 bits (300), Expect = 7e-32
 Identities = 100/329 (30%), Positives = 154/329 (46%), Gaps = 25/329 (7%)

Query: 8   RTAILGSM-GAFLLSALDRTFAAGPTSLKIALVLESRT-DIGWTRTLLDALEQVKQARPD 65
           RT+I+  + GA L + L    A      K+  +      D GW+       + +++A  D
Sbjct: 2   RTSIIRMLVGAALAAGLATGGAQADEPTKVGFIYVGPVGDFGWSHQHDQGRQALEKAFGD 61

Query: 66  GLDISWEYTDPLWNDDAENAMRFYAEGGEYDIIWAHG-RYSDQVKKLSAEFPDIMFV-VT 123
            +  S+         DAE  +R +A GG YD+++     + +   K++ +FP + F   T
Sbjct: 62  KVKTSF-VESVQEGADAERVVRQFAAGG-YDLVFTTSFGFMNPTLKVAQQFPKVKFEHAT 119

Query: 124 GSGNLPLGANQYWLYKRLHEPSYLLGMLAGRTTKSGVVGLVGTFAADDVNDQINAFLDGA 183
           G       AN      R +E  Y++G++AG TTKS VVG V +F   +V   INAF  G 
Sbjct: 120 GYKR---SANVATYAARFYEGRYVIGVIAGLTTKSKVVGYVASFPIPEVVSGINAFARGL 176

Query: 184 RSVRPDVRHRVSFIGSWSDNALAAEHANVQIASGADVVFMLTDNFKPCQ---EHRIICFA 240
            SV P+ + +V ++ SW D     E A   IA GADV+   TD+  P Q   E  I  F 
Sbjct: 177 HSVNPEAQVKVIWVNSWYDPGKEREAAETLIAQGADVLSQHTDSPAPVQVAEEKGIFAFG 236

Query: 241 NINDQSKLAPDAIASSAIIDWQPDIKWIISEWLKHKAGAPYDG--NTEPKWFSMSQGGVD 298
             +D S+  P A  ++ + +W        +E+   +  A  DG    E  W  ++ G V 
Sbjct: 237 QASDMSRFGPHAQLTAIVDNW--------NEYYIDRVKAVMDGTWKAEDTWGGLAAGMVH 288

Query: 299 IAPYHDFDAKLPVAVKEELAATRQKIISG 327
           +APY   +A LP  V E+  A R+ I+ G
Sbjct: 289 LAPY---NAALPADVVEKAEAVRKAIVDG 314