Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 10/264 (3%)

Query: 66  ATPLLLVGLGTVIAFRAKIWNIGQEGQVLAGAMCAYWASLWIGPLPYWIAFTVLVLAGLA 125
           ATPL+   LG ++  RA + N+G EG +  GA+   W S++ G    W    +   AG+A
Sbjct: 20  ATPLIFGTLGELLCERAGVLNLGIEGIMTLGALVG-WLSVYQG-CDLWTGVMLAACAGMA 77

Query: 126 GGGALGVLAGVLKTRFGTSEIISTVMLNYIVIFLLAYLLDGG-PWMETGVTVAYHQSPPV 184
            G    +L G+L    G S+ ++ + +  +   L  Y+     P   T  ++A       
Sbjct: 78  AG----LLQGLLTVPLGLSQHVTGIGVTLLCTSLSYYVYRLALPQTTTPPSIAPFAPFGD 133

Query: 185 NAMLEWPTLLGQGAHKLHFGFLLALVATVLCAVLLERTPLGYEIRAFGSNPTALRFRGTD 244
            A+ + P + G  A +     ++AL A V  A LL RTPLG  IR  G NP A   +G  
Sbjct: 134 GALADLPVIGGVLAQQTPLT-MVALCAVVAIAWLLYRTPLGLAIRMVGENPAAADAQGIS 192

Query: 245 ISRLLLVVMLVSGALAGLAGAGELFGTSHRLRAETLLGIGSSGIVVAMVGGLRPSGAMLA 304
           ++ + +  ++   AL  + GA       +      + G G   I + +    RP  A+  
Sbjct: 193 VTAVRMGAVMAGSALMAVGGAFLTLSAFNAFFFNMIGGRGWICIALVVFASWRPGKALFG 252

Query: 305 ALFFGALKSGAIYMRLQSGTPAGL 328
           AL F      A+  RLQ G  +G+
Sbjct: 253 ALLFALF--DALQTRLQQGGDSGI 274



 Score = 23.9 bits (50), Expect = 0.006
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 51  GAFGSQKALLGSLAKATPLLLVGLGTVIA 79
           GA      + G LA+ TPL +V L  V+A
Sbjct: 134 GALADLPVIGGVLAQQTPLTMVALCAVVA 162