Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 363 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  164 bits (414), Expect = 4e-45
 Identities = 107/339 (31%), Positives = 170/339 (50%), Gaps = 5/339 (1%)

Query: 4   VQRRSGNSLSWNFACYAAAMLCALVSAAALLHLSGGDVAKAFSSLIVGAFGSQKALLGSL 63
           ++RRS  S++   A    A+   L +   +    G + A A +   +       +L    
Sbjct: 5   LERRSEQSVAIALASPLLAIALTLTTMTIVFAALGQNPAAALAVYFITPLTDGYSLQEIA 64

Query: 64  AKATPLLLVGLGTVIAFRAKIWNIGQEGQVLAGAMCAYWASLWI-GPLPYWIAFTVLVLA 122
            KA+PL+++ +G  + +RA  WNIG EGQ+L GA+     ++ + G  P      V++LA
Sbjct: 65  VKASPLVMIAVGLALCYRANAWNIGAEGQLLIGAIAGSGLAVMMHGTNPGPWLLPVMLLA 124

Query: 123 GLAGGGALGVLAGVLKTRFGTSEIISTVMLNYIVIFLLAYLLDGGPWMETGVTVAYHQSP 182
           G   G A  ++  + K +FG SEI+ ++ML Y+   LL YL+ G PW +      +  + 
Sbjct: 125 GALAGAAYALIPALCKVKFGASEILISLMLVYVAGLLLDYLVRG-PWRDPA-GFNFPTTA 182

Query: 183 PVNAMLEWPTLLGQGAHKLHFGFLLALVATVLCAVLLERTPLGYEIRAFGSNPTALRFRG 242
             +     P L+     ++H G +L LVA    AVLL RT  G+EIR  G+ P A RF G
Sbjct: 183 EFDPAATLPLLIA--GSRVHAGLILTLVAVAAAAVLLGRTLKGFEIRVVGTAPRAARFAG 240

Query: 243 TDISRLLLVVMLVSGALAGLAGAGELFGTSHRLRAETLLGIGSSGIVVAMVGGLRPSGAM 302
            +  RL+L    +SGALAGLAG  E+ G    L+ +   G G + I+VA +G L P G +
Sbjct: 241 FNADRLVLTTFAISGALAGLAGIIEVAGPIGHLQPDISPGYGFTAIIVAFLGRLNPLGIL 300

Query: 303 LAALFFGALKSGAIYMRLQSGTPAGLVSAMEGLVLLFFL 341
            + LF      G    ++    P  +   ++G++L + L
Sbjct: 301 ASGLFLALTFIGGEQAQIALKLPQDMTGVIQGILLFYVL 339