Pairwise Alignments

Query, 310 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., branched chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  199 bits (506), Expect = 7e-56
 Identities = 109/300 (36%), Positives = 167/300 (55%), Gaps = 7/300 (2%)

Query: 9   LFISILAAMVRIATPLLFSAMGELVTQRAGIWNISVEGTMLLGAVVAYVIASSTGSPWLA 68
           + I +LAA V+  TP+L++ +GE++T+RAG+ N+ VEG M++G   A++    TG PW+A
Sbjct: 5   MVIPVLAAAVQCGTPILYATLGEMLTERAGVLNLGVEGMMIIGTFTAFLALHLTGDPWIA 64

Query: 69  LFVAVLACALLSVILSFVTIVLKSEQFIAGLALNLLASGLTLFWFQTYIIGRDPPKFAGF 128
           + VA L    L ++   V +V +  Q ++GLAL +   GL  +   T  +G       GF
Sbjct: 65  VVVAALCGGALGLVHGIVCLVFQGNQVVSGLALTIFGVGLADY-LGTPFVGTVT---TGF 120

Query: 129 EAVEIQYLSDIPVLGTVLFSQRVLTYVSFLLPLAVWFFLYRTRYGLEVRCVGENPKALDV 188
               +  L DIPVLG V F    L  +S++LP   W FL RTR+GL +R  GE+P A   
Sbjct: 121 TPFSLPVLGDIPVLGEVFFRHDALVNLSYVLPPLFWLFLARTRWGLALRATGEHPAAAAA 180

Query: 189 KGLSVGSRRCLAIMFGSVMSGFGGAFLMLGYSDRFVPDLIAGRGWLVVVAIIAGNWMPFR 248
            G++    R  A+  G  + G GGA+L L Y+  +  ++ AGRGW+ V  +I   W P R
Sbjct: 181 AGINPVLVRWAALFAGGALVGIGGAYLSLAYTHLWTNNMTAGRGWIAVALVIFAFWRPGR 240

Query: 249 VVGAIFIFALLEAVGIHAQVVGVSVPHHVFLVLPYVASL--VLLAGLRSRTH-QPAALGI 305
            V   ++F  + A  +  Q +G SVP  + L+LPY  ++  +L +  R +    PAALG+
Sbjct: 241 AVLGAYLFGGVMAFQLRLQAMGASVPSSLLLMLPYALTIGVLLFSSARGKGRGAPAALGV 300