Pairwise Alignments

Query, 300 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 320 a.a., chaperon-like protein for quinone binding in photosystem II from Synechococcus elongatus PCC 7942

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 58/190 (30%), Positives = 83/190 (43%), Gaps = 9/190 (4%)

Query: 8   ILVVGATGKFARWVIPELMRRDAVVHALVRNDARAAVARSLGVAEVFIGDLRNTDSLAEA 67
           +LVVGATG   R +    +     V  LVR+  R    R  G  ++  GDL   +SL  A
Sbjct: 3   VLVVGATGTLGRQIARRALDEGHRVRCLVRSPKRGNFLREWG-CDLVRGDLTQPESLTFA 61

Query: 68  TRGMDGVFHIGPAFTPDEAAM-------GIAIVEAAERNGVKKFAFSSVIQPTNTR-LKN 119
             G++ V       + D  +         + +++AA   GV++F F S+I     R +  
Sbjct: 62  LEGIEAVIDAATTRSTDSLSCYDVDWQGKVNLIKAATEAGVQRFVFCSIIDAEKHRDVPL 121

Query: 120 HASKIPVEEALYSSRLEYTILQPANFMQNIGIAWPSIILHGRFGEPFPKDIKIARVDYRD 179
              K   EE L  S L YTIL+ A FMQ +   +   +L GR          IA +   D
Sbjct: 122 MDIKYCTEEFLRQSGLNYTILRLAGFMQGLIAEFAIPVLEGRTAFITQDSDPIAYLSTLD 181

Query: 180 VAEVAAIALT 189
           +A  A  ALT
Sbjct: 182 IARFAVAALT 191