Pairwise Alignments

Query, 292 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 320 a.a., chaperon-like protein for quinone binding in photosystem II from Synechococcus elongatus PCC 7942

 Score = 50.4 bits (119), Expect = 5e-11
 Identities = 58/219 (26%), Positives = 80/219 (36%), Gaps = 16/219 (7%)

Query: 6   ILVTGATGKLGRLVVERLVAFGQPVRVFTRRPEAAGALFGKTVQIAAGDFGDRTSLETAV 65
           +LV GATG LGR +  R +  G  VR   R P+    L      +  GD     SL  A+
Sbjct: 3   VLVVGATGTLGRQIARRALDEGHRVRCLVRSPKRGNFLREWGCDLVRGDLTQPESLTFAL 62

Query: 66  RGVARLLLLSPISARLVTDQVAAAD-----------AAVAANVARIVKISGSDWTIEPAG 114
            G+  ++     +    TD ++  D           AA  A V R V  S  D   E   
Sbjct: 63  EGIEAVI---DAATTRSTDSLSCYDVDWQGKVNLIKAATEAGVQRFVFCSIID--AEKHR 117

Query: 115 NSISGDAHAAVERHLGSLPIEAVSLRPNAWMQVSLANIIRQVVTSDQVVAANLDAGIGYI 174
           +    D     E  L    +    LR   +MQ  +A     V+             I Y+
Sbjct: 118 DVPLMDIKYCTEEFLRQSGLNYTILRLAGFMQGLIAEFAIPVLEGRTAFITQDSDPIAYL 177

Query: 175 GARDIADVAVQQLLADRLDGRTLNLTGPDIVSFRQIASL 213
              DIA  AV  L     + +TL + GP   S  +I  L
Sbjct: 178 STLDIARFAVAALTTPATEKQTLPVVGPKAWSGLEIFRL 216