Pairwise Alignments

Query, 295 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 379 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas stutzeri RCH2

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 20/264 (7%)

Query: 7   AQVEPRVGSPSHGSLPETIARRVGDQWRITGHKTYATGIPLLRWVAVLAVTDEPEPRLG- 65
           A  EP+ GS +  S   T ARR GD + + G K + T       V V AVTD    + G 
Sbjct: 122 ALTEPQAGSDA--SSLRTRARRDGDHYVLNGAKQFITSGKHAGTVIVFAVTDPDAGKGGI 179

Query: 66  -SFLVPTSADGIRVEKTWNATGMRATNSDDLILDDVAIPLEDVLEIAPASEGLK------ 118
            +F+VPT + G +V +  +  G  A+++  +  +D+ +P+ +   +    EG +      
Sbjct: 180 SAFIVPTDSPGYQVVRVEDKLGQHASDTCQIAFEDLRVPVAN--RLGEEGEGYRIALANL 237

Query: 119 RDERMGAWYFSLVPAIYDGAARGARDWLIDFTTSRAPASLGAPLSTVPRIQDGLGEIEVL 178
              R+G      + A   G AR A +   D+   R   + G P+     +   L ++   
Sbjct: 238 EGGRIG------IAAQAVGMARAAFEAARDYARDRE--TFGKPIIEHQAVAFRLADMATQ 289

Query: 179 LTVNRRLLRSIAEDFDSGRAFGADAAAVKHTVIANAITVTTLALELGGNPGISRDNPLER 238
           + V R+++   A   + GR    +A+  K      A  V + A++  G  G   D P+ER
Sbjct: 290 IAVARQMVHHAAALREVGRPALVEASMAKLFASEMAEKVCSAAIQTLGGYGYLADFPVER 349

Query: 239 HHRDALSGKAHAPQNNLIRMMLAK 262
            +RD    + +   +++ R+++++
Sbjct: 350 IYRDVRVCQIYEGTSDIQRLVISR 373