Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 343 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  201 bits (510), Expect = 3e-56
 Identities = 110/322 (34%), Positives = 185/322 (57%), Gaps = 8/322 (2%)

Query: 9   RTLRRTLLQAVPTILGIVILNFFLLQLAPGDAADVLAGEAGSATEESVAALRARFGLDSP 68
           R + R L   +    GI I++F+++ LAPG   D+       A  E+   L A +GLD P
Sbjct: 6   RRMARKLAWMLFVFWGITIISFWVIHLAPGSPTDMQTTMNPLAGAETRKRLEALYGLDKP 65

Query: 69  VLEQLATYLGNLAQFSLGFS----PRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVL 124
           +  Q   +LG L++   G S    PR   PV D I +RLP T+ +   +L + +L  + +
Sbjct: 66  LHVQYVQWLGRLSRLDFGNSMSSDPR---PVWDKIKERLPLTVGMNVASLVLTMLCAIPI 122

Query: 125 GSLMASFAGRIPDRLLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIG-SQLK 183
           G   A + GR+ DR +++   + +++P FW+ L+L++LF + L WLP  G  ++  + + 
Sbjct: 123 GVASAHWQGRLFDRAMTVLVFIGFAMPGFWLALLLMLLFGIHLQWLPLSGLTSLDHAAMS 182

Query: 184 GFPALLDKARYMVLPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGVTAR 243
                 D   ++ +P        +A  +R  RA+MLEV   D++ TA AKGL    V  R
Sbjct: 183 PMGKAWDIMAHLAMPIFIYTFGSLAGLSRFMRASMLEVLRQDYILTARAKGLPVRTVIFR 242

Query: 244 HILRNALIPITTMAGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGILLLS 303
           H LRNAL+P+ T+ G+ + G++GG+V++E++++ PGLG+L ++AVM RD+ +++G L+L 
Sbjct: 243 HALRNALLPVITILGLSLPGLIGGSVIIESIFALPGLGQLFYQAVMARDYPLIMGNLVLG 302

Query: 304 SLLVIIANAAVDLVHAWLDPRI 325
           ++L ++ N   DL +   DPRI
Sbjct: 303 AVLTLVGNLLADLCYGLADPRI 324