Pairwise Alignments

Query, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  192 bits (488), Expect = 9e-54
 Identities = 114/289 (39%), Positives = 165/289 (57%), Gaps = 20/289 (6%)

Query: 59  LKVFLANPNALFGTAFLALVIAVALLAPVLYPGDPLSMVG--------KPFLWPGQHPAF 110
           L  FL +  A+   A   L + VA+ AP++ P +P  +           P    G +  F
Sbjct: 20  LYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHF 79

Query: 111 PLGTDSLGRDVLAGILHGSRISLFVGLMATALGLTFGVVVGAIAGYFSGWIDDLLVRLIE 170
            LGTD  GRD+ + IL+GSR+SL +G +A  L LT G+V+G  AGYF G ID  L+R  +
Sbjct: 80  LLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFAD 139

Query: 171 IFQTLPSFVLLVVLVAIVQPS----------ATTVTLAIAVISWPTVARLTRAEFRAIRE 220
           I  +  + ++ +++ AI + S             + + I V  WP  AR  RA   A ++
Sbjct: 140 IQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKK 199

Query: 221 KDFVMAARSLGFGHGRIIVREILPNALPPIIVTSSVMVATAILMESALSFMGLGDP-NVV 279
           K++V AAR +GF   RI+ R ILPN L PI+V S+V VA AI+ E+ALSF+GLG P +  
Sbjct: 200 KEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQP 259

Query: 280 SWGSMIGTGRELVRT-AWYLTALPGLAIVFTVLALNLIGDGLNDALNPR 327
           S GS+I  G   + + AW++TA PG+ +V  VL +NL+GD L D  NP+
Sbjct: 260 SLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPK 308