Pairwise Alignments

Query, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 534 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score =  314 bits (805), Expect = 5e-90
 Identities = 193/518 (37%), Positives = 277/518 (53%), Gaps = 13/518 (2%)

Query: 12  TRRAFLLSSVALATATAMPVLPVPSFAAEEPTRGGSVSINIGTEPPVLVLIAHSAGAAYY 71
           +RR+FL S+  LA A A+P        A  P  GG ++ ++ +E  +L     ++   Y 
Sbjct: 4   SRRSFLASTALLAGAAALPRFSWAQ-GAPAPVAGGVLTAHLSSEQRILNPALRASTGVYV 62

Query: 72  ISGKATESLLSYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSI 131
           I+ K  ESL+    D  P P+LAT W  + DG    F LR+ V+WHDG+ FT+  V +S 
Sbjct: 63  ITSKIIESLVDLGPDGAPTPVLATRWEAAADGKSVTFTLREGVKWHDGKPFTSADVQYSA 122

Query: 132 LALKENHPRGRATFAHVKEANVLNSHEVELTLAK-----PAPYLLTAFASFEAPIVPKHL 186
           + L + H           EA  +++ +    + +     P P LL A A     +VP+HL
Sbjct: 123 MELWKKHLNYGTQLQRYLEA--VDTPDATTAIFRYSRTMPLPLLLRALADL-GYVVPRHL 179

Query: 187 YEGTKIAENPHNVAPVGTGPYKFVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPA 246
           +EGT + ENP N AP+GTGP+KFVE+ RG + +  RN +YW   +PYLD++++RFI D +
Sbjct: 180 FEGTNVLENPANTAPIGTGPFKFVEYQRGQYIVAERNPEYWRKGEPYLDRVVWRFITDKS 239

Query: 247 AAVAAIETGEVQVST-ANLPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFNLENKYLAD 305
           AA AA+ETG+VQ+S    L L+DI+RL  +    V +     +      EFN   K LAD
Sbjct: 240 AASAALETGQVQISAYTQLALSDIERLAKDSRFEVSSRGNEANSFNNTVEFNHRRKELAD 299

Query: 306 IKVRHAIAHAVDKDFIVNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPAKSEKLLDE 365
           ++VR AIAHAVD DF V     G   R  G +      FY      Y FD  K+E LLDE
Sbjct: 300 VRVRRAIAHAVDVDFFVENFLYGRGKRATGFIPSISQAFYPGGAFPYPFDTKKAEALLDE 359

Query: 366 AGYARGADGFRFKLFIDPTQPSGPPKQTAEYIAQALAKVGIKVELRTQDFATFVKRVFTD 425
           AGY R   G RF L + P        Q A ++ Q+LA+VGIKVE+   D A  +  ++ D
Sbjct: 360 AGYPRQKGGERFSLRLLPILNGEDVPQFATFLQQSLAEVGIKVEIVQLDVAGALSAIYKD 419

Query: 426 RDFDIAIEGMSNLYDPTVGVQRLYWSKNFKP-GVPFTNGSKYSNPEVDRLLETAAVEIDP 484
            +FD+A        DP V      W ++  P G P+TN   + + EVD L++ AA EIDP
Sbjct: 420 WNFDLATGWHQYRGDPAVST--TVWFRSGSPKGAPWTNQFGWESAEVDTLIDDAAAEIDP 477

Query: 485 KKRLELFNEFQKLVVEDLPTLDIVTPAVITVYDKRVKN 522
            KR  L+ +   ++ E+LP         ++V +K V+N
Sbjct: 478 VKRKALYAQLVDVINEELPVWFATERQFVSVTNKVVQN 515