Pairwise Alignments

Query, 481 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 500 a.a., AAA family ATPase from Pseudomonas fluorescens SBW25-INTG

 Score =  364 bits (934), Expect = e-105
 Identities = 196/475 (41%), Positives = 296/475 (62%), Gaps = 8/475 (1%)

Query: 1   MNVAERKKQTVVSSGISGLDEILRGGLPASNLYIVQGAPGSGKTTAALQFLRAGVALGEP 60
           M+ ++ +     + GI GLD+IL GGL  S+L++++G PG+GKTT AL FL+AG   GE 
Sbjct: 1   MSTSKAQLSEKAAIGIEGLDDILAGGLSRSHLFLLEGEPGTGKTTVALHFLQAGAKSGER 60

Query: 61  CIYVSLSQTRAELEAIALSHGWTLD-GIRVEELSASDSI-NRAADQTIFQTTELRLDETR 118
            +Y++LS+T  EL   A SHGW LD  I + EL+  +S+ N    Q++  +++L L E  
Sbjct: 61  SLYITLSETERELRQGATSHGWDLDDNIHIFELTPPESLLNADHQQSLLYSSDLELGEAT 120

Query: 119 KAIESAIEEHKPSRLVYDSLLEIRLITADSPRFRRELIAFKAFLAQRNIVALLLDTQTSE 178
           + I   +E  KP+R+V DSL EIRL+   S R+RR+++A K +  + +   LLLD  T+E
Sbjct: 121 RQIFEVVERVKPTRVVIDSLSEIRLLAQSSLRYRRQILAIKHYFVRYDATVLLLDDLTTE 180

Query: 179 T-DRTGEEVDGIAHGVIRLDKSLEEYGGVRRRIEVSKMRGVPVADGYHDMAIREGEGVVV 237
           + D+T   V  +AHGVIRL++    YG  RRR+ V K RG     G+HD  I + +GV V
Sbjct: 181 SLDKT---VHSVAHGVIRLEELTPNYGAERRRVRVVKYRGQKYRGGFHDFTIMQ-DGVHV 236

Query: 238 FPRIVPGAAARTVKPQLIKSGVDTLDEMFGGGQESGTTTLVIGQAGTGKSTMASLYATAA 297
           FPR+V        K + + SG+  LD + GGG E+G+++L++G AGTGKS ++ ++A AA
Sbjct: 237 FPRLVAAEHRGGYKRETLSSGIAALDALMGGGVETGSSSLILGPAGTGKSLISMIFAAAA 296

Query: 298 LKRGESVGLFLFEERIETFFRRSEGLGMALRQFHEDGQLILRDFNPNEISPGEFGQIVQQ 357
           ++RGE   LF+F+E +   F R + +G+ L    E G L++   +  E+SPGEF   V++
Sbjct: 297 VERGEKAALFIFDEELGLLFERMKNMGIDLAALQETGNLLIEQVDAAELSPGEFSHRVRR 356

Query: 358 SVNSEKVKVVVIDSFTGYLNSLPHREKAVRDIQSLLKYLARAGVLTILIVAQHGLLGQGV 417
            V+   +K VVIDS  GY  ++P     +  +  LL YL R G  T + VAQHGL+G  +
Sbjct: 357 CVDERGIKTVVIDSINGYQAAMPEENALILHMHELLLYLNRRGAATFMTVAQHGLVGD-M 415

Query: 418 GIDVDVSFLGDTVLLLRIAEHEGRLRRSITVVKKRHGPHDLDVRELFIQSSGVSV 472
              VD+++L DTV+LLR  E  G++RR+I+++KKR G H+  +RE  I S G++V
Sbjct: 416 QAPVDITYLADTVILLRYFEALGKVRRAISIIKKRTGTHEATIREYRIGSQGMTV 470