Pairwise Alignments

Query, 481 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 582 a.a., KaiC 1 from Pedobacter sp. GW460-11-11-14-LB5

 Score =  134 bits (336), Expect = 1e-35
 Identities = 123/466 (26%), Positives = 212/466 (45%), Gaps = 16/466 (3%)

Query: 14  SGISGLDEILRGGLPASNLYIVQGAPGSGKTTAALQFLRAGVA-LGEPCIYVSLSQTRAE 72
           +GISGLDE+  GGLP+    +V G  GSGKT  +++F+  G     EP ++++  +   E
Sbjct: 21  TGISGLDEVTLGGLPSGRPTLVCGEAGSGKTLFSIEFIVKGALDYNEPGVFMAFEEKAEE 80

Query: 73  LEAIALSHGWTLDGIRVEELSASDSINRAADQTIFQTTELRLDETRKAIESAIEEHKPSR 132
           L+A   S G+ LD +  ++    D ++    + I +T E  L+     +  AI+     R
Sbjct: 81  LKANVASLGFDLDRLEKDKKIKLDYVHIDRSE-IEETGEYDLEGLFIRLGYAIDSIGAKR 139

Query: 133 LVYDSLLEIRLITADSPRFRRELIAFKAFLAQRNIVALLLDTQTSE-TDRTGEEVDGIAH 191
           +V D++  +     ++   R E+     FL  + + A++   +      R G E + ++ 
Sbjct: 140 VVLDTIENLFSGLNNAAILRAEIRRLFQFLKSKGVTAIITGERGGNGLTRQGLE-EYVSD 198

Query: 192 GVIRLDKSLEEYGGVRRRIEVSKMRGVPVADGYHDMAIREGEGVVVFPRIVPGAAARTVK 251
            VI LD  +      RR + + K RG       +   I + EG+ V P +        V 
Sbjct: 199 CVILLDHRIINQISTRR-LRIVKYRGSVHGTNEYPFLI-DDEGISVLP-VTSLELNHEVS 255

Query: 252 PQLIKSGVDTLDEMFGG-GQESGTTTLVIGQAGTGKSTMASLYATAALKRGESVGLFLFE 310
            + + SG+  LD+M G  G   G++ LV G AGTGK+++A+ +A +   RGE    F FE
Sbjct: 256 SKSLSSGIPALDKMLGNSGFYKGSSILVSGTAGTGKTSIAATFANSTCARGEKCLFFAFE 315

Query: 311 ERIETFFRRSEGLGMALRQFHEDGQLILRDFNPNEISPGEFGQIVQQSVNSEKVKVVVID 370
           E  +   R    +G+ L++    G L      P           + +++   K  VVV+D
Sbjct: 316 ESPKQIIRNMRSIGVDLQKHVTKGTLEFYASRPTLYGLEMHLVAIHKAIKKFKPSVVVLD 375

Query: 371 SFTGYLNSLPHREKAVRDIQSLLKYL---ARAGVLTILIVAQHGLLGQGVGIDVDVSFLG 427
             T  +        +V +++++L  L    +A  +T++  A           D  VS L 
Sbjct: 376 PITNLITI-----GSVSEVKTMLVRLIDFLQAEQITVMFTALTLNTIVNEQTDEGVSSLV 430

Query: 428 DTVLLLRIAEHEGRLRRSITVVKKRHGPHDLDVRELFIQSSGVSVI 473
           D  LL+R  E  G   R + ++K R   H   +RE  I   G++++
Sbjct: 431 DAWLLIRDIESNGERNRGLYIMKSRGMKHSNQIREFVITDQGLNLM 476



 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 12/231 (5%)

Query: 257 SGVDTLDEMFGGGQESGTTTLVIGQAGTGKSTMASLYATAALKRGESVGLFL-FEERIET 315
           +G+  LDE+  GG  SG  TLV G+AG+GK+  +  +           G+F+ FEE+ E 
Sbjct: 21  TGISGLDEVTLGGLPSGRPTLVCGEAGSGKTLFSIEFIVKGALDYNEPGVFMAFEEKAEE 80

Query: 316 FFRRSEGLGMALRQFHEDGQLILRDFNPNEISPGEFGQI--------VQQSVNSEKVKVV 367
                  LG  L +  +D ++ L   + +     E G+         +  +++S   K V
Sbjct: 81  LKANVASLGFDLDRLEKDKKIKLDYVHIDRSEIEETGEYDLEGLFIRLGYAIDSIGAKRV 140

Query: 368 VIDSFTGYLNSLPHREKAVRDIQSLLKYLARAGVLTILIVAQHGLLGQGVGIDVDVSFLG 427
           V+D+     + L +      +I+ L ++L   GV T +I  + G  G G+       ++ 
Sbjct: 141 VLDTIENLFSGLNNAAILRAEIRRLFQFLKSKGV-TAIITGERG--GNGLTRQGLEEYVS 197

Query: 428 DTVLLLRIAEHEGRLRRSITVVKKRHGPHDLDVRELFIQSSGVSVIAYNPL 478
           D V+LL          R + +VK R   H  +     I   G+SV+    L
Sbjct: 198 DCVILLDHRIINQISTRRLRIVKYRGSVHGTNEYPFLIDDEGISVLPVTSL 248