Pairwise Alignments

Query, 357 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 391 a.a., ROK family transcriptional regulator from Rahnella sp. WP5

 Score =  117 bits (294), Expect = 4e-31
 Identities = 105/388 (27%), Positives = 171/388 (44%), Gaps = 59/388 (15%)

Query: 16  SGLNSLSVRSYNERLVLSLLLQNEATTRLEIGEKTGLSAQTISVIVRSLEQEGLVVRGEA 75
           SG N    R++N R+V+  +  N   TR EI   T L+ QT+S I   LEQ G++     
Sbjct: 5   SGTNLEHARAHNRRVVIEAIRLNGELTRAEIARLTSLTPQTVSNIATELEQAGILSSHLP 64

Query: 76  QK-GRVGPPTTPLMLNSEGAYSVGVSVGYHNTHIVVVDFIGNVQHHRVMPHKAADTFDAP 134
           ++ G  G P TPL LN + AYS+G+ + + +   V+VD  G V+  +++ H      +  
Sbjct: 65  RRAGGRGQPATPLTLNPDSAYSIGIHLDHQSLLTVLVDLTGTVRFRKLI-HVQKPQPEPT 123

Query: 135 EALALEIRLAVAGLSESRQARIAGVGLALPTP----PIRSEP-------DHDVLHRYLEA 183
            AL  ++   +    +    +I GVG+ +P P     I S+        D+  +   L A
Sbjct: 124 LALIDQVLQEMRQQVKIDWRKILGVGVVMPGPFGVEGISSQGPTTLHGWDNIDIEARLSA 183

Query: 184 EFGLPVFVQNDITAAAGGESLFGTARQLQDFLFFYLGARLHCRLVLNHQIYNGNSPLSYD 243
             G PV ++ND T AA GE   G A+QL  F++ Y+G  L   +  + +IY G++  + +
Sbjct: 184 ATGWPVTLENDATVAAIGERFHGVAKQLSSFVYLYIGTGLGAGIFTDGRIYTGHAHNAGE 243

Query: 244 VGVL---------------ALER-----------RLPADSAMAEKLWGQDLSWPPLEATL 277
           VG +                LER            L   SAM E L   D      E   
Sbjct: 244 VGHIVVQPGGRECYCGNKGCLERYVSLQAAYEACGLDPMSAMPEDLLKVD------EKVF 297

Query: 278 ADWQQACAENLIQLTQSLLQFIELRTVVLSSFVPAAICEALCRLVRQEIPSVNAV----- 332
             W     E  +Q    +    + ++V++   +P  + E   +L+++  P  N+V     
Sbjct: 298 DKWLDTAVEPALQAINIMECVFDAQSVIIGGTMPKPLVE---KLIKRLTPLYNSVRSRYA 354

Query: 333 ------VGRTSAAPKAVGAASLPFSSRF 354
                 +G + +   A+GAA+LP    F
Sbjct: 355 QSARIRLGMSGSDTPALGAAALPIFDEF 382