Pairwise Alignments

Query, 357 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 400 a.a., putative transcriptional regulator, marR family from Phaeobacter inhibens DSM 17395

 Score =  162 bits (409), Expect = 2e-44
 Identities = 111/382 (29%), Positives = 183/382 (47%), Gaps = 39/382 (10%)

Query: 15  ASGLNSLSVRSYNERLVLSLLLQNEATTRLEIGEKTGLSAQTISVIVRSLEQEGLVVRGE 74
           + G+N   VR +NERL+LSLL +N A     +   TGLS QT+SVI+R LE +GL+ RGE
Sbjct: 10  SGGVNQTGVRVFNERLILSLLQRNGAMPGSALARGTGLSPQTVSVILRKLEADGLLQRGE 69

Query: 75  AQKGRVGPPTTPLMLNSEGAYSVGVSVGYHNTHIVVVDFIGNVQHHRVMPHKAADTFDAP 134
            Q+GRVG P+ P+ LN +G +S G+ +G  +  ++++D  G V+    + +         
Sbjct: 70  TQRGRVGKPSVPMGLNPDGLFSYGLKIGRRSVEVLLMDVCGAVRQQLRLRYPYPTPAVVF 129

Query: 135 EALALEIRLAVAGLSESRQARIAGVGLALP----------TPPIRSEPDHDVLHRYLE-A 183
           + L   +R   A L      RI G+G+A P            P  +  D   +    E A
Sbjct: 130 DFLRDSMRQIEAALPADLHPRICGIGVAAPFQLWTWHAQINAPAEALADWQTVDFTSEIA 189

Query: 184 EF-GLPVFVQNDITAAAGGESLFGTARQLQDFLFFYLGARLHCRLVLNHQIYNGNSPLSY 242
            F  LPV V ND TAA   E ++G  +  +D+ +F++GA +   +VLNH++  GN   + 
Sbjct: 190 RFSALPVHVVNDATAACRAEHMYGRGKAYRDYAYFFVGAFIGGGVVLNHRVLEGNQGNAG 249

Query: 243 DVGVLA-------------------LERRLPADSAMAEKLWGQDLSWPPLEATLADWQQA 283
            +G L+                   LE+RL        +LW   + W   +A +  W   
Sbjct: 250 ALGSLSTLGPEGREAKLLDLASIHLLEQRLRDAGKDPGQLWQLPMHWSGFDAEVTPWLDQ 309

Query: 284 CAENLIQLTQSLLQFIELRTVVLSSFVPAAICEALCRLVRQEIPSVNA--------VVGR 335
            A+ + + + +    I+   V++   +P +I  AL    R  + +++A          G 
Sbjct: 310 AADAIARASLATCAVIDFEAVLIDGALPDSIRAALVERTRAALSNLDARGLIPPHIECGA 369

Query: 336 TSAAPKAVGAASLPFSSRFMVN 357
                +A+GAAS P  S+++++
Sbjct: 370 IGPNARAIGAASGPIISQYLLD 391