Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 318 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 8/221 (3%)

Query: 98  DQKKQVADIEDLIAQKVDAIIVQPVTSTSANASIEKAVAAGIPVV-----LHTGRIESEA 152
           D   Q+  +E +I  KVDA+I+ P  S +    I+KAV AGI V+     L    ++S+ 
Sbjct: 79  DTANQIRIVEQMIVSKVDALIIAPADSKAMVPVIKKAVDAGITVINIDNQLDPAVVKSKN 138

Query: 153 YTTEIQGGAEHFG-KVMGDFLVKELGGKGNIWVLRGLAGHPEDTNRYNGLKQSLEGTEIK 211
                 G     G +++G++L K+L     + ++ G++       R  G K ++E  ++K
Sbjct: 139 INVPFVGPDNRKGARLVGEYLAKQLKAGDEVGIIEGVSTTTNAQARTAGFKDAMEAAQVK 198

Query: 212 IAAEEHGDWQYDKAKKVCETLYLSDPNVDGIWSSGADMTRACVDVFKQFG-SPIPPISGE 270
           + + + GDW+ +K  +V  ++    PN+  + +    M    V   +  G +    + G 
Sbjct: 199 VVSLQSGDWEINKGNQVAASMLSEYPNIKALLAGNDSMAVGAVSAVRAAGKAGKVQVVGY 258

Query: 271 GNNGFFGQWIADG-FKSISSEYSPAQGAAGIRAAVALLEGK 310
            N       + DG   + + +++  Q   GI  A+ +L+G+
Sbjct: 259 DNINAIKPMLKDGRVLATADQFAAKQAVFGIETALKILKGE 299