Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 318 a.a., putative D-ribose-binding periplasmic protein from Phaeobacter inhibens DSM 17395

 Score = 80.5 bits (197), Expect = 6e-20
 Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 18/269 (6%)

Query: 57  IGMSSFGVNANTWTVQVAHEAQAAADNDKRITKFILLDAGFDQKKQVADIEDLIAQKVDA 116
           I  ++ GV++   T + A  A A A+ D  +   ++LDAG D  +Q+A +EDLI Q+VDA
Sbjct: 31  ITQNNVGVDSYQTTYEKAFIAAAEANADVEV---VVLDAGGDVARQIAQMEDLIQQEVDA 87

Query: 117 IIVQPVTSTSANASIEKAVAAGIPVVLHTGRIESEAY--------TTEIQGGAEHFGKVM 168
           II+ P    +   ++ KA  A IPVV+    I    +           I  GA    ++M
Sbjct: 88  IIIWPTNGEAVIPAVRKAHQADIPVVVTNSNIAEAGFPFVATFSGPDNITQGARS-AEIM 146

Query: 169 GDFLVKELGGKGNIWV--LRGLAGHPEDTNRYNGLKQSLEGT--EIKIAAEEHGDWQYDK 224
            D   K LG +    V  + G  G+     R  G    L      ++   E+ GDW  +K
Sbjct: 147 CD-RFKSLGTENEAKVVHITGQPGYTTAIERAKGFNDRLPEVCPNVEQIDEQPGDWNREK 205

Query: 225 AKKVCETLYLSDPNVDGIWSSGADMTRACVDVFKQFGSPIPPISGEGNNGFFGQWIADGF 284
           +++V E   +   ++DG++S   +M    ++     G       G  N     + +A G 
Sbjct: 206 SQQVMEAFLVKYDDIDGVYSGDDNMGVGAMNAAVAAGREGITFVGATNFAVGYEAMAAGT 265

Query: 285 KSISSEYSPAQGA-AGIRAAVALLEGKAL 312
              S   SP   A A +++A+ LL G+ L
Sbjct: 266 YWGSIYQSPVDDAEAALKSAIDLLNGEEL 294