Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 313 a.a., L-arabinose ABC transporter, substrate-binding component AraU (from data) from Shewanella sp. ANA-3

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 16/264 (6%)

Query: 57  IGMSSFGVNANTWTVQVAHEAQAAADNDKRITKFILLDAGFDQKKQVADIEDLIAQKVDA 116
           +G S  G  +  W    +   +A A       KF   DA   Q+ Q+  +   IAQ VDA
Sbjct: 25  VGFSQVGSESG-WRTSFSEAVKAEAKQRGIDLKFA--DAQQKQENQIKAVRSFIAQGVDA 81

Query: 117 IIVQPVTSTSANASIEKAVAAGIPVVLHTGRI---ESEAYTTEIQGGAEHFGKVMGDFLV 173
           II+ PV  T     +++A  A IPVV+    I   +   + T I       G+ +G +L+
Sbjct: 82  IIIAPVVETGWKPVLKEAKRAKIPVVIVDRNIKVDDDSLFLTRIASDFSEEGRKIGQWLM 141

Query: 174 KELGGKGNIWVLRGLAGHPEDTNRYNGLKQSLEG-TEIKIAAEEHGDWQYDKAKKVCETL 232
            +  G  +I  L+G  G     +R  G  Q +      KI   + G++   K K+V E  
Sbjct: 142 DKTQGNCDIAELQGTVGATAAIDRAAGFNQVIANYPNAKIVRSQTGEFTRAKGKEVMEG- 200

Query: 233 YLSDPN---VDGIWSSGADMTRACVDVFKQF----GSPIPPISGEGNNGFFGQWIADGFK 285
           +L   N   +  +WS   +M    V   K+     G  I  +S +G   +F + +ADG  
Sbjct: 201 FLKAQNGQPLCAVWSHNDEMALGAVQAIKEAGLKPGKDILIVSVDGVPDYF-KAMADGDV 259

Query: 286 SISSEYSPAQGAAGIRAAVALLEG 309
           + + E SP  G     A  A L+G
Sbjct: 260 NATVELSPYLGGPAFDAIDAYLKG 283