Pairwise Alignments

Query, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 326 a.a., L-arabinose ABC transporter permease AraH from Klebsiella michiganensis M5al

 Score =  145 bits (367), Expect = 1e-39
 Identities = 84/266 (31%), Positives = 142/266 (53%), Gaps = 12/266 (4%)

Query: 61  ITAVGQMFVVLVGGLDLSIGSVVSF----TTAILALDLPGFVTIPAVFVLAGLIGATNGY 116
           + A G +F +  G  DLS+ SV++     T  ++ L    ++ I A  +L  L G  NG+
Sbjct: 61  MVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESMWIGIGAGLLLGALSGLVNGF 120

Query: 117 CVTRLSVHPIVATLSMQYIVLGITRVLRPVSGGAVPDSVRWMVEG--SLFGIPLPVFWGI 174
            + RL ++ ++ TL+   IV G+  ++       + D  R+   G  + FG+P P++  +
Sbjct: 121 VIARLKINALITTLATMQIVRGLAYIISDGKAVGIEDE-RFFTLGYANWFGLPAPIWLTV 179

Query: 175 VTMLVAWKLLYGSRYGLHLFAIGGGVASGSADAARNFGIPANRNILLAYVICTLFAALAG 234
             ++V   LL  + +G +  AIGG     + +AAR  G+P  R  ++ +V+  L +A AG
Sbjct: 180 ACLIVFGLLLNKTTFGRNTLAIGG-----NEEAARLAGVPVVRTKIIIFVLSGLVSAAAG 234

Query: 235 VFLAGRIVSGDPNVGLLMELDAITAVAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLL 294
           + LA R+ SG P   +  EL  I+A  +GG  L GG+G +   V G+  L  + N MNLL
Sbjct: 235 IILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLL 294

Query: 295 NVTPFVQTAIKGILLMAVVALQSRKK 320
           N++PF Q  ++G++L+A V     K+
Sbjct: 295 NISPFSQYVVRGVILLAAVIFDRYKQ 320