Pairwise Alignments

Query, 316 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (332), Expect = 1e-35
 Identities = 88/294 (29%), Positives = 141/294 (47%), Gaps = 4/294 (1%)

Query: 19  SYYLLAMLLVILFVARPQMLNANVLGVFVRQVVPLGILVLGQLLVMRVKSIDLSGGGVIL 78
           S   L  L+V++    P     + L   +RQ     I+ +G  LV+    IDLS G V+ 
Sbjct: 34  SLIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLA 93

Query: 79  LINYCISSGIFPGASLGFYVALALTTGLVIGLFNGVMVAKRRVSAVIVTLALSIVLVGFV 138
           L     ++ +     +   V  AL  G  +G  +G+++AK +V A I TL    +L G  
Sbjct: 94  LCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVT 153

Query: 139 QYLSSGKPPG----DVPKLFADLFNTRFAGLPSPVILWIAVTALMALLLSQTVFGRFVAA 194
              + G+P      D    FA        G+P PV L + V A    LL+ T FGR+V A
Sbjct: 154 MVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYA 213

Query: 195 VGESMPAAHFSGVPVERTVILAHTLAGLMAAIAALVQTASIAVGSVRVGLDLPVLSVAAT 254
           VG +  A   SG+ V+R  I  + + GL+AA+A ++ T+ ++      G+   + ++AA 
Sbjct: 214 VGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAV 273

Query: 255 ILGGVVFGRGEGGVWGPFFGVLCFAFLFVAMTTFGVGDAGKLVAQGMIILLAAI 308
           +LGG     G+G + G   G L   FL  A+    V    +++A+ ++ILLA +
Sbjct: 274 VLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVL 327