Pairwise Alignments

Query, 296 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 320 a.a., chaperon-like protein for quinone binding in photosystem II from Synechococcus elongatus PCC 7942

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 8/231 (3%)

Query: 3   VVLGANGRAGRETAHALIDLRKPVRVVLRRPEQAEKWTKLGASVAISSIEDVPSLAAALS 62
           +V+GA G  GR+ A   +D    VR ++R P++     + G  +    +    SL  AL 
Sbjct: 4   LVVGATGTLGRQIARRALDEGHRVRCLVRSPKRGNFLREWGCDLVRGDLTQPESLTFALE 63

Query: 63  GASGAFLLSPPPVSGDPYKRADEIGSA---LAEAVRQSGLSKVVALSSVGAQHQTGTGVI 119
           G   A + +    S D     D        L +A  ++G+ + V  S + A+      ++
Sbjct: 64  GIE-AVIDAATTRSTDSLSCYDVDWQGKVNLIKAATEAGVQRFVFCSIIDAEKHRDVPLM 122

Query: 120 ATLNSLEKHLAEVAPSTTFLRPGYFVETWGEIAPAVI--ADGVLPSFLEPSQKIPMVSTI 177
                 E+ L +   + T LR   F++  G IA   I   +G      + S  I  +ST+
Sbjct: 123 DIKYCTEEFLRQSGLNYTILRLAGFMQ--GLIAEFAIPVLEGRTAFITQDSDPIAYLSTL 180

Query: 178 DVGRTAACLLSDEFSGKRIVELRGPQDWSANDVAAAFGRVLDRNVVTAFVP 228
           D+ R A   L+   + K+ + + GP+ WS  ++     R+  +    A +P
Sbjct: 181 DIARFAVAALTTPATEKQTLPVVGPKAWSGLEIFRLCERLSGKETKIARLP 231