Pairwise Alignments

Query, 286 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 364 a.a., permease of the drug/metabolite transporter from Synechococcus elongatus PCC 7942

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 53/215 (24%), Positives = 83/215 (38%), Gaps = 39/215 (18%)

Query: 32  PALA----IAGTVITWSFSFAAIGYALREVEPLPLAAIRFALAAVFAIAWIAWR-RPRWF 86
           PALA    +      W  +  A+        PL LA +R   A +  +   AW  RP+  
Sbjct: 16  PALAKTPLLLAPFFLWGTAMVAMKGTTDHTTPLFLATVRLLPAGILVLLAAAWLGRPQPQ 75

Query: 87  LPRDFVVLAISGLLGIAAYNVLLNLGQAAVSAGAAGFIVNTQPLFMVLLAVLFLKERFGR 146
             R +  + + GL+    +   L  G     AG    ++++QPL + LLA     ER G 
Sbjct: 76  GWRAWAWIGLFGLVDGTLFQGFLAEGLTRTGAGIGSVMIDSQPLIVALLAYWLFGERIGL 135

Query: 147 WNWVGTIVGFSGVALIASGQPGGLS----------------------------------F 172
           W W+G  +G  G++L+   +   L+                                  F
Sbjct: 136 WGWLGLAIGIVGISLLGLPETWLLALGDRLLQGLHIPVQLVGPAIAELWPTDQSWLSALF 195

Query: 173 GTGSTLIVLAAACAAAYSILQRPLFARAEPLDVTG 207
             G  L++LAA   A  +IL R +   A+P+  TG
Sbjct: 196 NNGRWLMLLAALSMAVGTILSRYVSRWADPIAATG 230



 Score = 33.1 bits (74), Expect = 9e-06
 Identities = 21/74 (28%), Positives = 34/74 (45%)

Query: 90  DFVVLAISGLLGIAAYNVLLNLGQAAVSAGAAGFIVNTQPLFMVLLAVLFLKERFGRWNW 149
           D++ L+ + L G A    L     A+ S  +   +    P+F +L   LFL E+ G   W
Sbjct: 259 DWLALSYATLFGSAIAYGLFFYFAASGSLTSLSALTFLTPVFALLFGNLFLGEKLGMIQW 318

Query: 150 VGTIVGFSGVALIA 163
           VG  +    + LI+
Sbjct: 319 VGVSLSLVSILLIS 332