Pairwise Alignments

Query, 592 a.a., Permease from Sinorhizobium meliloti 1021

Subject, 575 a.a., TrkA domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  164 bits (414), Expect = 1e-44
 Identities = 142/592 (23%), Positives = 270/592 (45%), Gaps = 37/592 (6%)

Query: 11  ILIGLMIAFIWGRLRYD----LIAVLALLAAVFTGIVPHKVAFSGFGDDIVIIVASALVV 66
           + I + +A I G +R+     L+  + LL  V   +V  +   S   +  ++ +   ++ 
Sbjct: 7   LTIAIFLATIVGLVRFQNRPALVFGVTLLVLVAFNLVTKEQLLSSMSNPGLVTLVLLILC 66

Query: 67  SAAVERSGVIEAFLHRVAPRVTSVRDQVVILVAAVTVLSVFIKNIGALAMMIPVAFQMAR 126
           S A+E++ ++     +V   V+  R   + L     + S  + N   +A ++     +  
Sbjct: 67  SFALEKTRLLRVIAAKVI--VSGYRTTWLRLYGMTALSSALLNNTAVVATLLS---PIRN 121

Query: 127 RSKASPSSFLMPMAFGSLLGGLITLVGTSPNIVVSRMREELTGQPFSMFDFTPVGIGIAA 186
                 S  L+P+++ ++LGG +TLVGTS N++V+ M  + + Q  S F FT +G  +  
Sbjct: 122 NPHHVASKLLLPLSYAAILGGTLTLVGTSTNLIVNSMVIDASNQSLSFFSFTAIGALLVL 181

Query: 187 AGVVFLAFGYRLLPRDREAVPTMEKALSIKDYMTEARITGNSQVVGKSI-----RHLSAL 241
              + L    R LP          +    K Y  +A++   S+++G+S+     RHL +L
Sbjct: 182 GCGLVLRIASRWLP------DIAHQETCSKGYFIDAKVVAGSELIGRSVEDNGLRHLESL 235

Query: 242 LDDEVMVTGLVRNQVERLLPLPDLVLQVDDIVLLEGDPEALERGIRRARLELEGHNRPTE 301
              EV+  G + + V      P  VLQ DD ++  GD   + +  + + LE+        
Sbjct: 236 FLVEVVRNGRLISPVT-----PTEVLQQDDRLIFSGDIAKVMQLSQFSGLEMFAEKNGL- 289

Query: 302 AKGVDEEIAGIEVVVGPRSVLIEQTAKRLALHNRFNINLLAVSRSSQRFTERLRDIVLRS 361
              +D  +   EVVV   SVL+ +T K+      F+   +A+ R  +  + +L ++ +++
Sbjct: 290 ---LDSNLT--EVVVKQESVLVGKTMKKAGFRALFDAAAVAIRRDGEEISGKLGEVQIKA 344

Query: 362 GDVLVLKGDLVLLPTKLMELGLLPLA--EREIRLGNPRERLMPVLILAGAMAFTALGVLP 419
           GD LVL      L    +    + ++  E E R  N ++  + +      +   A GV+ 
Sbjct: 345 GDFLVLAVGKDFLTRHNISKNFIVISGVEPETR-NNGKKAWISIGGFVLTLVLAATGVVE 403

Query: 420 VATAFFAAAVLTVLFGALSLREAYEAVDWPIVIMLGALIPVSESIRTTGGADLIAGALAQ 479
           +         + +    L++ E        I +++ + I +S ++  +G A+L+A  +  
Sbjct: 404 MLQGMLLLLGVLIFTQCLNVNEVVRRFPVDIWLVVASAILLSHALVNSGVAELVASWVEG 463

Query: 480 LAGALPVFGALAMIMVVAMAATPFLNNAATVLVVAPIAVTLAHRLGYNPDAFLMAVAVGA 539
            A    +  AL ++ +     T  + N A   ++ PIA ++A   G +   F+M VA  A
Sbjct: 464 TAEKEHLMLALLLVYLATWLMTELITNNAAAALMFPIAYSIALGFGVDFLPFVMTVAFAA 523

Query: 540 ACDFLTPVGHQCNTLVLGPGGYRFGDYWKLGLPLSC---IVVVLGVPLILLF 588
           +  F++P G+Q N +V   G YR  D+ K+G+P+S     +V+L VPL   F
Sbjct: 524 SGSFISPYGYQTNLMVYNAGRYRLMDFVKVGVPVSLTYGAIVLLTVPLFFPF 575