Pairwise Alignments

Query, 462 a.a., Na+/H+ antiporter from Sinorhizobium meliloti 1021

Subject, 389 a.a., Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  278 bits (712), Expect = 2e-79
 Identities = 159/421 (37%), Positives = 235/421 (55%), Gaps = 47/421 (11%)

Query: 41  LTKPFMRFLRIEATAGIILLLSTLLALGLANTAWSSSFLAFWEMPAGVRLGDIGIYRSLK 100
           + K    FL  E+  GI+LL++   A+ +AN+  +  +  F      VR+G + +++ L 
Sbjct: 1   MEKAIRNFLSQESAGGILLLIAVAFAMLMANSPLAGFYQGFLGTEVQVRVGALDLHKPLL 60

Query: 101 HWINDGLMTFFFFVIALELKRELVLGELRNPRMAALPVAAALGGMAAPAGIYLLLVGGGP 160
            WINDGLM  FF +I LE+KREL+ G L +   A+LP  AA+GGM  PAGIYLL   G P
Sbjct: 61  LWINDGLMALFFLLIGLEVKRELLEGALSSVAQASLPTFAAIGGMLVPAGIYLLFNYGDP 120

Query: 161 -GASGWGTVMSTDTAFVIGCLALLGSRVPGSLRLFLLSLAIFDDIGAILIVAVGYGEPLN 219
              +GW    +TD AF +G +ALLGSRVP +L++FLL+LAI DD+G I+I+A+ Y   L+
Sbjct: 121 ITQAGWAIPAATDIAFALGIMALLGSRVPVALKVFLLALAIIDDLGVIVIIALFYSSDLS 180

Query: 220 WVALGTGGLGFAFVAGIALLGIRSIPVYFAMGSAIWLAFDASGVHATLVGVILGLMTPAR 279
            V+L    +    +  +   G+ S+  Y  +G  +W+A   SGVHATL GVI+    P R
Sbjct: 181 TVSLIIASIAIVGLVALNRKGVTSLAPYGVLGLILWVAVLKSGVHATLAGVIIAFCIPLR 240

Query: 280 RWVSEIRLHAILDRVIAHPPGDHRSRDTAARSDLHRAGVATREAVSPIERLEIALHPWVA 339
                                                    ++  SP E LE +LHPW  
Sbjct: 241 ----------------------------------------AKDGSSPSEHLEHSLHPWST 260

Query: 340 FAIMPLFAVSNAGIPIEDANFDV---PLTIAIVVAFVVGKPAGIVLFSFLAVKLRLASRP 396
           F I+P+FA +NAG+ + + + D    P+ + I +  ++GKP G++LFSF+AVKL+LA  P
Sbjct: 261 FLILPVFAFANAGVALGNMSLDTLMSPVPVGIALGLMLGKPIGVMLFSFVAVKLKLAQLP 320

Query: 397 EQLSWSLLAAGSLLTGIGFTMALFIAELAFE---PELLIPVKLGVLGASVISAALGFMAL 453
           + + W  +A  + + GIGFTM++FIA LAFE   P      +LG L  S+ +A +G+  L
Sbjct: 321 DGIGWKQIAPVAAMCGIGFTMSMFIASLAFEQADPMFGDLARLGTLMGSIFAALIGYFWL 380

Query: 454 T 454
           +
Sbjct: 381 S 381