Pairwise Alignments

Query, 781 a.a., MrcB penicillin binding protein B from Sinorhizobium meliloti 1021

Subject, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

 Score =  250 bits (639), Expect = 2e-70
 Identities = 178/560 (31%), Positives = 277/560 (49%), Gaps = 27/560 (4%)

Query: 201 LVRQGPYQGPYAQYNQFPPHLIDAVLSIEDRRFMDHFGIDVRGIGRALVRNFEAGSVIEG 260
           L +  P Q  + + +QFP  L+DA+L  EDR F  H G+    IGRA+V N +AG  ++G
Sbjct: 172 LEKDSPEQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQG 231

Query: 261 GSTITQQLIKLQYLDSDRTIKRKIQEFVIALWLELKLGKKEILTRYLNSAYLGAGAT--- 317
           GST+TQQL K  +L SDRT+ RK++E  +AL ++ +  K  IL  YLN  YLG       
Sbjct: 232 GSTLTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAI 291

Query: 318 -GMPAAARVYFNKNIDVLNLPESAMLAGLLRAPSQWNPIDNLEGARQRTAVVLDTMVANG 376
            G   A+R+YF + +  L + + A+L G+++ PS +NP+   E AR+R  +VL  M+ + 
Sbjct: 292 HGFGLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHD 351

Query: 377 KITAPDAERVKESFATLNPTMPTPRSGSWFADWISPRASEIAG---PSPGTTTVRTTLVP 433
            +TAP+ ++       +  T         +   +S    E  G    +     V T+L P
Sbjct: 352 ILTAPEYQQAVTRPLDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDP 411

Query: 434 HLQQIAERVVRNALDTEGRAVG--ASQAALVAMTPDGAVVAMVGGRDYKQSQFNRAVTAM 491
             Q   E+ + + +    +  G     AA+      G + AMVGG+      FNR + A 
Sbjct: 412 VSQSKLEQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNAS 471

Query: 492 RQPGSTFKLFVYYAAL--KAGFTPTDRVLDAPIDVNG-----WSPENSSGRYRGWVSIAE 544
           RQ GS  K  VY  AL     +     + D P+ + G     W+P N   +YRG V +  
Sbjct: 472 RQIGSLVKPAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYL 531

Query: 545 AFARSLNAPTVALAQEVGLDNVIAAARELGIDAPLV-STPSLALGTSEVSLLELTSAYAS 603
           A A+SLN PTVAL  ++G+D V A   +LG++   +   PS+ LG+  ++  ++   Y +
Sbjct: 532 ALAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQT 591

Query: 604 VRFG--KAPVEPWGIVHFQAAGQPRAFRVGSHTTPAIDLSAYQSDLVGLLQLAVERGTGR 661
           +     KAP+     V     G    +      + A+D  A       + Q  V+ GTGR
Sbjct: 592 LTNSGKKAPLSALRSV-LDLEGNV-LYESLPRVSQAVDQQAAWLTTYAMKQ-GVQEGTGR 648

Query: 662 EAD---PGAFAAGKTGTSQNNRDAWFVGFTEPLIAAVWVGNDDDTPMKGVTGGDLPAHIW 718
             +     A  AGKTGT+ +NRD+WFVG     +  +W+G DD+ P K +TG      ++
Sbjct: 649 YLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTK-LTGASGALRVY 707

Query: 719 RDFMREAMAAPAPIPERPEG 738
             +++  +     +P  PEG
Sbjct: 708 AQYLKYRIPEKLQLP-WPEG 726