Pairwise Alignments

Query, 781 a.a., MrcB penicillin binding protein B from Sinorhizobium meliloti 1021

Subject, 625 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  332 bits (852), Expect = 3e-95
 Identities = 214/537 (39%), Positives = 301/537 (56%), Gaps = 29/537 (5%)

Query: 215 NQFPPHLIDAVLSIEDRRFMDHFGIDVRGIGRALVRNFEAGSVIEGGSTITQQLIKLQYL 274
           NQ  P L  +VL+IED  F DH GI+  GIGRA+V NF +G V+EGGST+T QL+K  +L
Sbjct: 84  NQISPKLQQSVLAIEDSNFYDHPGINPIGIGRAIVANFSSGGVVEGGSTLTMQLVKNLFL 143

Query: 275 DSDRTIKRKIQEFVIALWLELKLGKKEILTRYLNSAYLGAGATGMPAAARVYFNKNIDVL 334
             DR   RK+ E V+AL LE  + K  IL  YLN  Y G    G+  A+R YFNK+   L
Sbjct: 144 TPDRNFGRKLSEAVLALRLEQVISKDRILELYLNQVYWGRNLYGVEMASRSYFNKSAANL 203

Query: 335 NLPESAMLAGLLRAPSQWNPID--------NLEGARQRTAVVLDTMVANGKI-----TAP 381
           +  E++ LAGL+ AP  + P D         LE A++R  +VL  +V  G++     +A 
Sbjct: 204 DWAEASFLAGLIAAPEFYTPFDERDRLSPQRLERAKERQRLVLQRLVEIGQLSPSAASAA 263

Query: 382 DAERVKESFATLNPTMPTPRSGSWFADWISPRASEIAGPS---PGTTTVRTTLVPHLQQI 438
            AE +K  F  ++   P+  S  + +D +    ++  G S    G   V+TT+   +Q++
Sbjct: 264 AAEPLK--FGEISSFRPS--SAPYVSDAVIQELAQQFGRSAVVQGGLRVQTTIDLRMQRL 319

Query: 439 AERVVRNALDTEGRA-VGASQAALVAMTP-DGAVVAMVGGRDYKQSQFNRAVTAMRQPGS 496
           AE+V++       RA + A + ALVA+ P    + AMVGG DY+ SQ+NR   A RQPGS
Sbjct: 320 AEKVIQENYQRNRRAGLRADEMALVAIDPRTHFIKAMVGGVDYRTSQYNRVTQARRQPGS 379

Query: 497 TFKLFVYYAALKAG-FTPTDRVLDAPI----DVNGWSPENSSGRYRGWVSIAEAFARSLN 551
            FK FV+YAAL  G + P   + D P+        +SP+N    + G +S+  A A+S N
Sbjct: 380 AFKPFVFYAALATGKYRPNSSIADTPVTYQLGAETYSPQNYDRSFAGNMSLTSALAQSRN 439

Query: 552 APTVALAQEVGLDNVIAAARELGIDAPLVSTPSLALGTSEVSLLELTSAYASVRFGKAPV 611
            P V L Q VGLD VI   R +GI +P+    SL LG   V+ LELT+AYA++  G    
Sbjct: 440 IPAVRLGQTVGLDRVIEICRRIGISSPMQPVVSLPLGAIGVTPLELTNAYATLASGGWYA 499

Query: 612 EPWGIVHFQAAGQPRAFRVGSHTTPAIDLSAYQSDLVGLLQLAVERGTGREADPGAFAAG 671
            P  I+  + +   R         P +   A  + L  ++Q  V  GTGR A      AG
Sbjct: 500 PPTLILQVRDSQGRRLLDHTPRPQPELQSKAV-AQLNQMMQAVVTSGTGRAAQFNRPVAG 558

Query: 672 KTGTSQNNRDAWFVGFTEPLIAAVWVGNDDDTPM-KGVTGGDLPAHIWRDFMREAMA 727
           KTGT+ + RD WFVG+T  L A+VW+GNDD++ +  G TGG + A IWR+FM++A+A
Sbjct: 559 KTGTTSDERDIWFVGYTPDLAASVWLGNDDNSKIGGGATGGAIAAPIWREFMQQALA 615