Pairwise Alignments

Query, 382 a.a., membrane efflux protein from Sinorhizobium meliloti 1021

Subject, 359 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 100/345 (28%), Positives = 153/345 (44%), Gaps = 35/345 (10%)

Query: 43  AESADPRLAPPLVRVAEATRPERAERA---FTGTIAARVQSNLGFRVPGKIVERLVDVGQ 99
           +  A+P   PP V + E  RP  ++     F+G + +   + L F V G+I   L+D G 
Sbjct: 28  SSEAEPAPEPPRVALVEPLRPAESKAEALRFSGVVQSVTSTQLSFEVSGRIERILIDEGT 87

Query: 100 QVKAGQALMRIDETDLRLALTAKRNAVAAARAVLVQAIADERRYATLVKGGVAATPQRYE 159
           +V+ GQ L ++D TD RL L         A A L Q  AD  R  TL+  G+        
Sbjct: 88  RVRRGQTLAQLDRTDYRLQL-------REAEARLRQLEADLARKRTLLAEGIL------- 133

Query: 160 QAKAALDTAAAQLAAAEAEARVAENETTYSVLVAGADGTVVATLGEPGQVVAAGQAVVQL 219
            A AA++   A   AA      A+    +S L A  DG V   L EP  VVA G  V ++
Sbjct: 134 -APAAIEALQANTVAARVARDSAQRNIDHSTLTAPFDGVVARRLAEPDMVVAVGTPVFEM 192

Query: 220 AHAGLREALVALPETVRPAI--GSE--AEASVYGSDGRRGRARMRQISDAADPQTRTYEA 275
                 E  V LPE+   +I  G E  AEA +  +D  R   R ++ S       RTY  
Sbjct: 193 QDNRHIEVSVDLPESAALSIPLGPELQAEAELVIAD-LRLPLRYKEHSTQPREGARTY-- 249

Query: 276 RYVLDGDAA---SAPLGATVTISI-RNGEGQSE---VAVPVGAVLNDGSRTGVWVVDQAS 328
           R VL G+     +   G  + + + R  + +++     +P+ A L  GS    ++   A 
Sbjct: 250 RLVLQGEPPEDFNLLPGMAMRVRLERPAQPETDNDGFRLPLSA-LQTGSDGKHFIWQAAD 308

Query: 329 ATARFVPIEIKRLGEETASVTGIELGEQ--VVALGAHLLKDGAPV 371
             AR + +E++++  + A + G  L  Q  ++  G   L D  P+
Sbjct: 309 GRARRLAVELQQVEGDQALIRGDALQAQLPIIVAGGSKLHDDQPI 353