Pairwise Alignments

Query, 382 a.a., membrane efflux protein from Sinorhizobium meliloti 1021

Subject, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 5/287 (1%)

Query: 72  GTIAARVQSNLGFRVPGKIVERLVDVGQQVKAGQALMRIDETDLRLALTAKRNAVAAARA 131
           G +    Q +L  +  G++V   VDV   VK  Q L+ I       AL A +  +A+A A
Sbjct: 42  GVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLASATA 101

Query: 132 VLVQAIADERRYATLVKGGVAATPQRYEQAKAALDTAAAQLAAAEAEARVAENETTYSVL 191
              +A A   RY  L   G A +  + + A+A   +A A + +A+A    A+    Y+ +
Sbjct: 102 QNREAQAQLNRYRQLFPKG-AISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYTNI 160

Query: 192 VAGADGTVVATLGEPGQVVAAGQAVVQLAHAGLREALVALPETVRPAIGSEAEASVYGSD 251
            A  DG V   + E G+ VA G  +++            +P+  +P +   ++ +V  + 
Sbjct: 161 TAPYDGIVTQRMVELGETVAPGTPLLRGFSLDELRVETEIPQRYQPYVADVSQFTVRTAQ 220

Query: 252 GRRGRARMRQISDAADPQTRTYEARYVLDGDAASAPLGATVTISIRNGEGQSEVAVPVGA 311
           G + +     +   ADPQ+ T++ R  L  ++A+   G  V      G+ +  + VP  A
Sbjct: 221 GEQLKPVEFSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFNYGQ-REVLVVPSSA 279

Query: 312 VLNDGSRTGVWVVDQASATARFVPIEIKRL-GEETASVTGIELGEQV 357
           VL     + V+ V+         P+ + ++ G+    ++G+ELG+ V
Sbjct: 280 VLRRAELSAVYRVNNGQRALN--PVRLGQVYGDYVEVLSGLELGDVV 324