Pairwise Alignments

Query, 382 a.a., membrane efflux protein from Sinorhizobium meliloti 1021

Subject, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 88.6 bits (218), Expect = 3e-22
 Identities = 91/341 (26%), Positives = 149/341 (43%), Gaps = 41/341 (12%)

Query: 53  PLVRVAEATRPERAERAFTGTIAARVQSNLGFRVPGKIVERLVDVGQQVKAGQALMRIDE 112
           P V+VA+A      +  F     A  +S+L FRV G+I +  V  G +VK G  L  I+ 
Sbjct: 41  PRVKVAQAGEKVSDKLFFPAVANAAERSHLSFRVAGEISKFHVKEGARVKQGDILAEIEP 100

Query: 113 TDLRLALTAKRNAVAAARAVLVQAIADERRYATLVKGGVAATPQRYEQAKAALDTAAAQL 172
           TD RLA+       A AR  ++   +  RR   LV+ G+         AK+  D  AAQ 
Sbjct: 101 TDYRLAVDN-----AQARFSVID--SQYRRSQPLVEKGLL--------AKSQFDEIAAQR 145

Query: 173 AAAEAEARVAENETTYSVLVAGADGTVVATLGEPGQVVAAGQAVVQLAHAGLREALVALP 232
             A AE  +A+   +++ L A  DG +     E  + V  GQ +V + +    E L+ LP
Sbjct: 146 QIARAELELAKLRLSFTQLRAPMDGIISRVSAEQFESVQVGQQIVNIHNIDSVEVLIQLP 205

Query: 233 E---TVRPAIG--SEAEASVYGSDGRRGRARMRQISDAADPQTRTY---------EARYV 278
           +     +P     ++ E  V    G+   AR+++ +   DP T T+         E   +
Sbjct: 206 DRLYATQPTASELAKIETVVRVPSGQVYPARIKEFTTEPDPATGTFTVTLSLPMPEQELI 265

Query: 279 LDGDAAS-APLGATVTISIRNGEGQSEVAVPVGAVLN------DGSRTGVWVVDQASATA 331
           LDG A   +  G  V ++  N      +++P+ A+ N      D +   VW+++  +  +
Sbjct: 266 LDGMAVEVSAKGQHVGLNPLN-----TISIPIEAIFNADGDELDKTAQYVWLLNNDNTVS 320

Query: 332 RFVPIEIKRLGEETASVTGIELGEQVVALGAHLLKDGAPVR 372
           +      K          GI  G+++V  G   L+DG  V+
Sbjct: 321 KRQVRLAKASRSHVQVSEGINAGDRLVVAGVARLRDGMKVQ 361