Pairwise Alignments

Query, 382 a.a., membrane efflux protein from Sinorhizobium meliloti 1021

Subject, 384 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  159 bits (401), Expect = 2e-43
 Identities = 114/346 (32%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 30  AAFAFVFETPARDAESADPRLAPPLVRVAEATRPERAERAFTGTIAARVQSNLGFRVPGK 89
           AA A V  +  ++A  A P   P L +V  A    +++  + G + AR +++ GFR+ GK
Sbjct: 11  AATAMVLASCGKEAPKA-PEPRPALTQVVGAAG--QSDMLWVGEVRARYETDQGFRIGGK 67

Query: 90  IVERLVDVGQQVKAGQALMRIDETDLRLALTAKRNAVAAARAVLVQAIADERRYATLVKG 149
           +VER VD+G  VK GQ L R+D  D  L+  A      AA A  + A A+  R   L++ 
Sbjct: 68  VVERKVDIGAVVKKGQILARLDPVDAGLSAAAANAQTKAAEADFLVAKAEYERQKKLLEK 127

Query: 150 GVAATPQRYEQAKAALDTAAAQLAAAEAEARVAENETTYSVLVAGADGTVVATLGEPGQV 209
              +    ++  +A    A A+L  A A+A V  N+  Y+ LVA  DG V     EPGQV
Sbjct: 128 QFISQ-SAFDSREAQFKAALARLDQARAQAAVTGNQAGYTDLVAEKDGVVTDVKVEPGQV 186

Query: 210 VAAGQAVVQLAHAGLREALVALPETVRPAI--GSEAEASVYGSDGRRGRARMRQISDAAD 267
           V+AGQ  ++LA AG +E +VA+PE     I  G+ A   ++ +  +   AR+R+++ AAD
Sbjct: 187 VSAGQPAIRLALAGDKEVVVAVPEGRMKGIEPGTSAVIRLWANQDQSYAARVREVAPAAD 246

Query: 268 PQTRTYEARYVLDGDAASAPLGATVTISIRNGEGQSEVAVPVGAVLNDGSRTGVWVVDQA 327
             TR+++ +  +    A   LG T  + I  G  ++ + VP  A+     +  VWVV+  
Sbjct: 247 AATRSFQVKVTVLEPDAGLRLGMTAGVLI--GSAEAPLLVPTAALTRQDGKNTVWVVNPQ 304

Query: 328 SATARFVPIEIKRLGEETASV-TGIELGEQVVALGAHLLKDGAPVR 372
           S   +   +      E+   V  G+  GE+VV  G H L+ G  VR
Sbjct: 305 SGEVQPRSVTTGPFREDGVVVEKGLARGERVVIAGVHKLQPGQLVR 350