Pairwise Alignments

Query, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

Subject, 1026 a.a., Cation/multidrug efflux pump from Pseudomonas stutzeri RCH2

 Score =  770 bits (1988), Expect = 0.0
 Identities = 417/1020 (40%), Positives = 623/1020 (61%), Gaps = 8/1020 (0%)

Query: 1    MSFNLSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATARE 60
            M FNLSA A++ R + ++ ++LLA  G  ++  LG++EDP FT K + + T WPGATA E
Sbjct: 1    MRFNLSAWALQNRQIVVYLMLLLAIVGALSYSKLGQSEDPPFTFKAMVIQTQWPGATAEE 60

Query: 61   MQDLVAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDE 120
            M   V E +EK++ E   Y+R+ + +RPG + +T   +DS     + + +YQ RKK+GD 
Sbjct: 61   MSRQVTERIEKKLMETGEYERIVSFSRPGESNVTFMARDSMRSKDIPDLWYQIRKKIGDI 120

Query: 121  ARNLPSGVFGPFVNDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINIL 180
                P GV GPF NDE+      +YAL   G     L   A+ I+  L  V  V K+ ++
Sbjct: 121  QHTFPPGVRGPFFNDEFGTTFGNIYALTGSGFDYAILKDYADRIQLQLQRVKSVGKVELI 180

Query: 181  GERPEQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSV 240
            G + E+I++E S  KLATLG+  + +  AL+ QN VT AG ++T   +V +R  G++ +V
Sbjct: 181  GLQDEKIWIELSNVKLATLGVPLEAVRQALEAQNAVTAAGFVETISDRVQLRVTGSFETV 240

Query: 241  QAIAATPIVAAGRTLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGK 300
            + I   PI  AGRT ++ D AEV RG+ DP    +R  GEPA+ L   M+ G + L LG+
Sbjct: 241  KQIRDFPIRVAGRTFRIGDVAEVHRGFNDPPAPRMRFMGEPALGLAVSMKSGGDILVLGQ 300

Query: 301  ALEERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGWRVG 360
            ALE+  A + + LP GM L KVSDQ   +   VGEF+     AL +VLLVS  SLG R G
Sbjct: 301  ALEQEFARLQQELPAGMQLRKVSDQPAAVKTGVGEFVKVLIEALVIVLLVSFFSLGVRTG 360

Query: 361  IVVALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMD 420
            +VVAL++PL LA+ F  M        +I+LGAL+LALGL+VDDAIIA+E+M +KME+G D
Sbjct: 361  LVVALSIPLVLAMTFAAMSYLDIGLHKISLGALVLALGLMVDDAIIAVEMMAIKMEQGYD 420

Query: 421  RIKAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAV 480
            R+KAA++AW+ TA PML+GTL+T  G +P+  A S+ GEY  +IF VV  +LI SW+ AV
Sbjct: 421  RLKAASFAWTSTAFPMLTGTLITAAGFLPIATANSSTGEYTRSIFQVVAISLIASWIAAV 480

Query: 481  IFTPYLGVKMLPDI-KPVEGGH------HAIYDTPNYRRLRGIIEFAVRHKYVTCAVVGI 533
            +F P +G K+LPD+ K     H      H  Y TP Y+R+R ++ F VR +     +   
Sbjct: 481  MFVPLIGEKLLPDLAKKTAHKHGTSSEGHDPYATPFYQRVRRLVTFCVRRRKTVILLTLA 540

Query: 534  VMALSVVGMGGVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADIL 593
            + A +VV    V  QFFP S R E++V++++ EGAS++ T A V +LE  L+E+   D  
Sbjct: 541  IFAAAVVLFRLVPQQFFPASGRLELMVDLKLAEGASLKATEAEVRRLEELLKERAGIDNY 600

Query: 594  TSYIGQGAPRFFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRV 653
             +Y+G G+PRF+  +  +LP  +FA+ VVL     +REAL+  L   + +   P    RV
Sbjct: 601  VAYVGTGSPRFYLPLDQQLPATSFAQFVVLADSIESREALRSWLIERMREDF-PSLRGRV 659

Query: 654  TQLVFGPYTPFPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVP 713
            T+L  GP   +PV+FR+ G     +  ++ +    +   P V   + DW   + ++R   
Sbjct: 660  TRLENGPPVGYPVQFRVTGEHIDVVRGLARQVAAKVNENPHVANVHLDWQEPSKMVRLNV 719

Query: 714  DQDRLNLIGLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSL 773
            DQDR   +G++ AE +  ++   +G  V+Q RE+   + ++ R     RL+ + L   ++
Sbjct: 720  DQDRARALGVTTAELSGFLRRTFTGSSVSQFREDNELIEILLRGTERERLELSMLPSLAI 779

Query: 774  MSRDGRQVPLDQIGHSEIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPL 833
             +  GR VPL Q+   E  FEE ++  R+R P +T+R+D+    QP  + ++I   L  +
Sbjct: 780  PTESGRSVPLSQVATLEYGFEEGVIWHRNRLPTVTVRADVYGEQQPAALVREIEPTLAEI 839

Query: 834  IASLPVGYRIEMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAPL 893
               LP GY +E+GG +E+S +   ++    P  +  +L +++ Q++S S   MV LTAPL
Sbjct: 840  RDQLPGGYLLEVGGTVEDSERGQRSVNAGMPLFVIVVLTLLMAQLKSFSRSAMVFLTAPL 899

Query: 894  GLAGVVPVLLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAGLHDYHAVIEAT 953
            G+ GV   LLLF QPFGF A+LG I L+G++MRN++IL +QI+++  AG   + A++EAT
Sbjct: 900  GIIGVALFLLLFGQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIGAGQARFSAIVEAT 959

Query: 954  VQRTRPVILTALAAVLAFVPLTHSVFWGSMAYTLIGGTAVGTVMILLFLPALYAAWFRIK 1013
            V+R RP++LTALA+VLA +PL+ S+F+G MA  ++GG  V T + LLFLPALYAAWFR++
Sbjct: 960  VRRFRPIVLTALASVLAMIPLSRSIFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRVR 1019