Pairwise Alignments

Query, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

Subject, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  555 bits (1431), Expect = e-162
 Identities = 323/1017 (31%), Positives = 549/1017 (53%), Gaps = 12/1017 (1%)

Query: 5    LSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATAREMQDL 64
            ++A  +  R ++    ++    G  AF +LGR EDP+FTIK   V T +PGAT +++++ 
Sbjct: 22   VAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEE 81

Query: 65   VAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDEARNL 124
            V  PLEK IQ+LT+ D V + +  G + +TVT+K++  P  + + + + R+K+ D    L
Sbjct: 82   VTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGAL 141

Query: 125  PSGVFGPFVNDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINILGERP 184
            P GV  P V D++ DV   L A+  +G   +EL+   + +R++L  + GV K+++ G++ 
Sbjct: 142  PPGVNPPLVIDDFGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQ 201

Query: 185  EQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSVQAIA 244
            EQ+F+E S  +++TLGIS Q +   L  QN V+ AG+I      + I   G ++ V+ + 
Sbjct: 202  EQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLG 261

Query: 245  ATPIVAAGR--TLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGKAL 302
               +   G    + L D AEV+RGY +  + +I   G+ A+ +G    QG N +E+G+  
Sbjct: 262  DLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRF 321

Query: 303  EERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGWRVGIV 362
            + R A +    P+G+ +A+V  Q   +D +V  F++    A+ +V++V L  +G R G++
Sbjct: 322  DRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLL 381

Query: 363  VALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMDRI 422
            + L + LT+   F+ M        RI+LGAL++ALG+LVD+AI+ +E +++  ++G  R+
Sbjct: 382  IGLILLLTVLGTFIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRL 441

Query: 423  KAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAVIF 482
            +AA    + T  P+L  T++ +    P+G +    GEY G +F V+  +L++SW  A+  
Sbjct: 442  QAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISL 501

Query: 483  TPYLGVKMLPDIK-PVEGGHHAIYDTPNYRRLRGIIEFAVRHKYVTCAVVGIVMALSVVG 541
            TP+         K P  G     Y    +   R  +EF +R  ++T  V+ + +A S+ G
Sbjct: 502  TPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYG 561

Query: 542  MGGVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADILTSYIGQGA 601
               VK  FFP+S  P  +V+V MPEG  I  T A + +LE+WL  Q   D +T+  G+G 
Sbjct: 562  FTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGL 621

Query: 602  PRFFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRVTQLVFGPY 661
             RF    +PE    A+ +I     D     AL  R RA + D   P+   ++ Q+  GP 
Sbjct: 622  QRFMLTYSPEKSYAAYGEITTRVTDYQQLAALMARFRAHL-DARYPQINYKLKQIELGPG 680

Query: 662  TPFPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVPDQDRLNLI 721
                +E RI+G DP  L  I+ + +++M   P       DW  RT VL    ++ +    
Sbjct: 681  GGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRY 740

Query: 722  GLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSLMSRD-GRQ 780
            G++ A+  + + +  SG  +   R+    +P+VAR   E R+D   +    + S      
Sbjct: 741  GITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEY 800

Query: 781  VPLDQI--GHSEIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPLIASLP 838
            +PL Q+  G+ E+R+E+P++ R++R  ++T+ +D +   +  E +  +   LQP I ++P
Sbjct: 801  IPLQQVTLGY-EMRWEDPLIVRKNRKRMLTVMADPDLLGE--ETAATLQQRLQPQIEAIP 857

Query: 839  V--GYRIEMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAPLGLA 896
            +  GY +E GG  E S  A  +L K  P     M ++ +    S+    +V LT PL + 
Sbjct: 858  LPPGYFLEWGGEYESSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVI 917

Query: 897  GVVPVLLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAGLHDYHAVIEATVQR 956
            GV   LL  N PFGF A+LG + L+G+L++N ++L +QI+    +G   Y AV++A++ R
Sbjct: 918  GVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSR 977

Query: 957  TRPVILTALAAVLAFVPLTHSVFWGSMAYTLIGGTAVGTVMILLFLPALYAAWFRIK 1013
             RPV + A+  +L  +PL   +F+  MA T++ G    TV+ L+ +P LY  +  +K
Sbjct: 978  VRPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVK 1034